RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PDZD8Q8NEN9 1154 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 RIN3Q8TB24 985 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 E2F7Q96AV8 911 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 ZFYVE19Q96K21 471 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 ZSWIM1Q9BR11 485 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 LSM14BQ9BX40 385 aaKnown RBP18.64■□□□□ 0.57
CCDC188-201ENST00000439765 FBXO44Q9H4M3 255 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 LTB4R2Q9NPC1 389 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 TDP1Q9NUW8 608 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 HESX1Q9UBX0 185 aa18.64■□□□□ 0.57
CCDC188-201ENST00000439765 CHORDC1Q9UHD1 332 aaPredicted RBP18.64■□□□□ 0.57
CCDC188-201ENST00000439765 WDR87Q6ZQQ6 2873 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 M0QYV0 167 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 TULP2O00295 520 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 USP17L7P0C7H9 530 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 MAGEA9P43362 315 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 SLC8A3P57103 927 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 PDE4CQ08493 712 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 BST2Q10589 180 aaKnown RBP18.63■□□□□ 0.57
CCDC188-201ENST00000439765 SYCP1Q15431 976 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 PIGZQ86VD9 579 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 C1orf210Q8IVY1 113 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 YAF2Q8IY57 180 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 CELF5Q8N6W0 485 aaKnown RBP18.63■□□□□ 0.57
CCDC188-201ENST00000439765 UBA3Q8TBC4 463 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 NELL2Q99435 816 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 ACP6Q9NPH0 428 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 TRPV5Q9NQA5 729 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 IL37Q9NZH6 218 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC188-201ENST00000439765 SIK3Q9Y2K2 1263 aa18.63■□□□□ 0.57
CCDC188-201ENST00000439765 FAM92AA1XBS5 289 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 SOBPA7XYQ1 873 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 OAS1P00973 400 aaKnown RBP18.62■□□□□ 0.57
CCDC188-201ENST00000439765 PNMA6AP0CW24 399 aaPredicted RBP18.62■□□□□ 0.57
CCDC188-201ENST00000439765 HDCP19113 662 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 WEE1P30291 646 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 PPP3CCP48454 512 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 PGFP49763 221 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 FCHO2Q0JRZ9 810 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 TPRG1Q6ZUI0 275 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 BPIFB1Q8TDL5 484 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 OVCA2Q8WZ82 227 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 IRF7Q92985 503 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 FAM81BQ96LP2 452 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 SEMA4AQ9H3S1 761 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 OBP2AQ9NY56 170 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 DNAJC12Q9UKB3 198 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 KIAA1257Q9ULG3 409 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 CNTN6Q9UQ52 1028 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 FHOD1Q9Y613 1164 aa18.62■□□□□ 0.57
CCDC188-201ENST00000439765 SHISA7A6NL88 538 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 ZNF263O14978 683 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 CDC25BP30305 580 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 KLK7P49862 253 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 KIF11P52732 1056 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 RAPGEF1Q13905 1077 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 UBXN2BQ14CS0 331 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 LCLAT1Q6UWP7 414 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 VSTM4Q8IW00 320 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 SHC3Q92529 594 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 CLDN23Q96B33 292 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 CCSER2Q9H7U1 834 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 KIF9Q9HAQ2 790 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 HEBP1Q9NRV9 189 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 COMMD8Q9NX08 183 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 SMPD4Q9NXE4 827 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 SCML2Q9UQR0 700 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 MTF2Q9Y483 593 aaPredicted RBP18.61■□□□□ 0.57
CCDC188-201ENST00000439765 GPR179Q6PRD1 2367 aa18.61■□□□□ 0.57
CCDC188-201ENST00000439765 FAM170BA6NMN3 283 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 XPO1O14980 1071 aaKnown RBP18.6■□□□□ 0.57
CCDC188-201ENST00000439765 SETSIPP0DME0 302 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 TARSP26639 723 aaKnown RBP18.6■□□□□ 0.57
CCDC188-201ENST00000439765 GNA15P30679 374 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 PDE6CP51160 858 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 ADIGQ0VDE8 80 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 DPY19L2P1Q6NXN4 242 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
CCDC188-201ENST00000439765 PCMTD1Q96MG8 357 aaPredicted RBP18.6■□□□□ 0.57
CCDC188-201ENST00000439765 RNF38Q9H0F5 515 aa18.6■□□□□ 0.57
CCDC188-201ENST00000439765 TLR8Q9NR97 1041 aaKnown RBP18.6■□□□□ 0.57
CCDC188-201ENST00000439765 MRPS17Q9Y2R5 130 aaKnown RBP18.6■□□□□ 0.57
CCDC188-201ENST00000439765 A0A1W2PQH9 124 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 ARNTLO00327 626 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 COCHO43405 550 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 OLFM2O95897 454 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 ZDHHC11BP0C7U3 371 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 CD72P21854 359 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 RPS9P46781 194 aaKnown RBP18.59■□□□□ 0.57
CCDC188-201ENST00000439765 USP4Q13107 963 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 ZNF268Q14587 947 aaPredicted RBP18.59■□□□□ 0.57
CCDC188-201ENST00000439765 STILQ15468 1287 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 CNGA2Q16280 664 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 PKDCCQ504Y2 493 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 HECTD3Q5T447 861 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 KLHDC7AQ5VTJ3 777 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 SPECC1LQ69YQ0 1117 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 ZNF852Q6ZMS4 543 aa18.59■□□□□ 0.57
CCDC188-201ENST00000439765 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms