RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CCR3P51677 355 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 PDE4CQ08493 712 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 PON2Q15165 354 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 EML3Q32P44 896 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 FBXO43Q4G163 708 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 VWA3BQ502W6 1294 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 ADGRG2Q8IZP9 1017 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 ZNF276Q8N554 614 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 UBR7Q8N806 425 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 RBBP8NLQ8NC74 664 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-216ENST00000439475 GPT2Q8TD30 523 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CHRDQ9H2X0 955 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 SEMA4AQ9H3S1 761 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CCSER2Q9H7U1 834 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CYLDQ9NQC7 956 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CLIC5Q9NZA1 410 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 CFAP97Q9P2B7 532 aa11.02□□□□□ -0.65
MCF2L-216ENST00000439475 A0A1W2PQH9 124 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 O00370 1275 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 TRDMT1O14717 391 aaKnown RBP11.01□□□□□ -0.65
MCF2L-216ENST00000439475 KRT5P13647 590 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 EEF1GP26641 437 aaKnown RBP11.01□□□□□ -0.65
MCF2L-216ENST00000439475 CXCL12P48061 93 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 GALK1P51570 392 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 TKTL1P51854 596 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 NRLP54845 237 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 COG7P83436 770 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 FZD5Q13467 585 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 ZNF528Q3MIS6 628 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 PREPLQ4J6C6 727 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-216ENST00000439475 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 BTBD8Q5XKL5 378 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 RBM43Q6ZSC3 357 aaKnown RBP11.01□□□□□ -0.65
MCF2L-216ENST00000439475 NUDT18Q6ZVK8 323 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 RSRC2Q7L4I2 434 aaKnown RBP11.01□□□□□ -0.65
MCF2L-216ENST00000439475 GPRIN1Q7Z2K8 1008 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 ARHGEF19Q8IW93 802 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 SIX6OS1Q8N1H7 587 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 ANKRD20A12PQ8NF67 263 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 UBA3Q8TBC4 463 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 RNF139Q8WU17 664 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 KCTD13Q8WZ19 329 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 GOLGA1Q92805 767 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 CD101Q93033 1021 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 HSFY1Q96LI6 401 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 MED15Q96RN5 788 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 P2RY13Q9BPV8 354 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 TUBGCP2Q9BSJ2 902 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 LINC00597Q9H2U6 94 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 NDST4Q9H3R1 872 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
MCF2L-216ENST00000439475 APEX2Q9UBZ4 518 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 STRIP2Q9ULQ0 834 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 NFE2L3Q9Y4A8 694 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 F5P12259 2224 aa11.01□□□□□ -0.65
MCF2L-216ENST00000439475 KIF26AQ9ULI4 1882 aaPredicted RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 HELZP42694 1942 aaKnown RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 SHISA7A6NL88 538 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 KCNJ18B7U540 433 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 RNF225M0QZC1 329 aaPredicted RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 CYP26A1O43174 497 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 ZBED1O96006 694 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 ADH1CP00326 375 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 SP9P0CG40 484 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 SLC9A1P19634 815 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 USP8P40818 1118 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 YWHAGP61981 247 aaKnown RBP eCLIP11□□□□□ -0.65
MCF2L-216ENST00000439475 ZXDBP98169 803 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 CSTF1Q05048 431 aaKnown RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 GAD2Q05329 585 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 KCNJ12Q14500 433 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 DHCR24Q15392 516 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 STX1AQ16623 288 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 ARHGAP44Q17R89 818 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 TMEM196Q5HYL7 178 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 C10orf120Q5SQS8 335 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 TRIM65Q6PJ69 517 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 TXNDC11Q6PKC3 985 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 HTR3DQ70Z44 454 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 TTC30AQ86WT1 665 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 IRF2BP1Q8IU81 584 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 SPEM1Q8N4L4 309 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 RIN3Q8TB24 985 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 KAT5Q92993 513 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 NKD2Q969F2 451 aaPredicted RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 KREMEN1Q96MU8 473 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 KLF16Q9BXK1 252 aaPredicted RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 FAM126AQ9BYI3 521 aaPredicted RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 ULBP1Q9BZM6 244 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 DCLK3Q9C098 648 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 NAT10Q9H0A0 1025 aaKnown RBP11□□□□□ -0.65
MCF2L-216ENST00000439475 CNGB3Q9NQW8 809 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 OLA1Q9NTK5 396 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms