RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CSH1P0DML2 217 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 CSH2P0DML3 217 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 PSMA2P25787 234 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 MRPS22P82650 360 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 PTP4A2Q12974 167 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SH3PXD2AQ5TCZ1 1133 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 PLEKHA7Q6IQ23 1121 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 FRMD7Q6ZUT3 714 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SLC44A1Q8WWI5 657 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 ZNF606Q8WXB4 792 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 USP13Q92995 863 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 TMIGD2Q96BF3 282 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 FAF2Q96CS3 445 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 RAB6BQ9NRW1 208 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 KCNK4Q9NYG8 393 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SLC9A2Q9UBY0 812 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 IP6K2Q9UHH9 426 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 POMPQ9Y244 141 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 TMEM191CA6NGB0 347 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 VNN1O95497 513 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 APRTP07741 180 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 CDK4P11802 303 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 ADARP55265 1226 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 CDO1Q16878 200 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 KCTD21Q4G0X4 260 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SPDYAQ5MJ70 313 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 BSPRYQ5W0U4 402 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DARS2Q6PI48 645 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SPATA18Q8TC71 538 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 CDH22Q9UJ99 828 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DTNAQ9Y4J8 743 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 HEY1Q9Y5J3 304 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 GRIA1P42261 906 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 PKNOX1P55347 436 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DBN1Q16643 649 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 DNAL1Q4LDG9 190 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 ANKRD20A4Q4UJ75 823 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SH3D19Q5HYK7 790 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 MPP5Q8N3R9 675 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 FAM156AQ8NDB6 213 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 RIN3Q8TB24 985 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 SLC35B2Q8TB61 432 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 RBM17Q96I25 401 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 CCDC17Q96LX7 622 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 XAB2Q9HCS7 855 aaKnown RBP13.9□□□□□ -0.18
ACTN1-204ENST00000438964 TMCO1Q9UM00 188 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 PLLPQ9Y342 182 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 COQ4Q9Y3A0 265 aa13.9□□□□□ -0.18
ACTN1-204ENST00000438964 ASTN2O75129 1339 aaPredicted RBP13.9□□□□□ -0.19
ACTN1-204ENST00000438964 TESPA1A2RU30 521 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 AIM2O14862 343 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 TBC1D12O60347 775 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ITGAVP06756 1048 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 DESP17661 470 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ACO1P21399 889 aaKnown RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 STT3AP46977 705 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 STX3Q13277 289 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 CUL2Q13617 745 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 CNGA3Q16281 694 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 LRRC8BQ6P9F7 803 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 CHSY1Q86X52 802 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 CDAN1Q8IWY9 1227 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ARFGAP1Q8N6T3 406 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 FOXP3Q9BZS1 431 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 COPS7BQ9H9Q2 264 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ZNF358Q9NW07 568 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 MAGED2Q9UNF1 606 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 DOLKQ9UPQ8 538 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 DKC1O60832 514 aaKnown RBP eCLIP13.89□□□□□ -0.191e-7■■■■■ 54.2
ACTN1-204ENST00000438964 GRAP2O75791 330 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 TMCC1O94876 653 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 TGDSO95455 350 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 FGFR3P22607 806 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ABCG1P45844 678 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 PSMD7P51665 324 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 PGGT1BP53609 377 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 COPAP53621 1224 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 TBL3Q12788 808 aaKnown RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 NRF1Q16656 503 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ALKBH8Q96BT7 664 aaKnown RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 DCUN1D1Q96GG9 259 aa13.89□□□□□ -0.19
ACTN1-204ENST00000438964 ZNF512Q96ME7 567 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-204ENST00000438964 PRICKLE1Q96MT3 831 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms