RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 NR5A2O00482 541 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 APOA1P02647 267 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CCDC130P13994 396 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 INSRRP14616 1297 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CDH2P19022 906 aaPredicted RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 GRK3P35626 688 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 NAMPTP43490 491 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 FXR2P51116 673 aaKnown RBP eCLIP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 BOP1Q14137 746 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CSHL1Q14406 222 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 PDIA6Q15084 440 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 PHF21BQ96EK2 531 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 XPNPEP3Q9NQH7 507 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 NSMCE4AQ9NXX6 385 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CCNT2O60583 730 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CDH16O75309 829 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 ZNF682O95780 498 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 LTFP02788 710 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 SLC2A3P11169 496 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 MAGEA9P43362 315 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 GSSP48637 474 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CLK1P49759 484 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 TRIP10Q15642 601 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 FBXW10Q5XX13 1052 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 MRNIPQ6NTE8 343 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 P3H2Q8IVL5 708 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 BBS7Q8IWZ6 715 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CSGALNACT1Q8TDX6 532 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 GRAMD1AQ96CP6 724 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 TLR8Q9NR97 1041 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 LNPEPQ9UIQ6 1025 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 PSMD12O00232 456 aaPredicted RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 DAB1O75553 588 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CTDNEP1O95476 244 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 AGTP01019 485 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 FEN1P39748 380 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 GRB10Q13322 594 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 DET1Q7L5Y6 550 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 STRA8Q7Z7C7 330 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CENPLQ8N0S6 344 aaPredicted RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 AGO4Q9HCK5 861 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 DUSP10Q9Y6W6 482 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 H0YC42 278 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 DYRK3O43781 588 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 S100A5P33763 92 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 CDH8P55286 799 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 GEMIN4P57678 1058 aaKnown RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 TERF2Q15554 542 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 TRIP4Q15650 581 aaPredicted RBP10.67□□□□□ -0.7
SHPRH-206ENST00000438092 ZNF333Q96JL9 665 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 PNMA5Q96PV4 448 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 KCNF1Q9H3M0 494 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 MROH8Q9H579 483 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 MKL2Q9ULH7 1088 aa10.67□□□□□ -0.7
SHPRH-206ENST00000438092 FAM47E-STBD1D6RA91 191 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 VEGFAP15692 232 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MSH3P20585 1137 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CXCL9Q07325 125 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ZNF280DQ6N043 979 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CES3Q6UWW8 571 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ARID3BQ8IVW6 561 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 FBXO36Q8NEA4 188 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CDCA5Q96FF9 252 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MTA3Q9BTC8 594 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 GOLGA8TH3BQL2 631 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 RGS5O15539 181 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 NFICP08651 508 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ENO2P09104 434 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ATP6V1B1P15313 513 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ATP6V1C1P21283 382 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 OR1E1P30953 314 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 HERVK_113P62684 666 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CACHD1Q5VU97 1274 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MTSS1LQ765P7 747 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 EPS8L3Q8TE67 593 aaKnown RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 NACC2Q96BF6 587 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MIR1-1HGQ9H1L0 117 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 AP4E1Q9UPM8 1137 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 USP15Q9Y4E8 981 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 IFRD1O00458 451 aaPredicted RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 BCAT1P54687 386 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 RPL10AP62906 217 aaKnown RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 OTUD4Q01804 1114 aaKnown RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 OVOS1Q6IE37 1185 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 MARK2Q7KZI7 788 aaKnown RBP10.66□□□□□ -0.7
SHPRH-206ENST00000438092 RXFP2Q8WXD0 754 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CLIP3Q96DZ5 547 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 PDGFCQ9NRA1 345 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CISHQ9NSE2 258 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 SH3BP4Q9P0V3 963 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 KRT20P35900 424 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 TRIM32Q13049 653 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 SLC39A12Q504Y0 691 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CBWD3Q5JTY5 395 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 CBWD5Q5RIA9 395 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 LRRC8BQ6P9F7 803 aa10.66□□□□□ -0.7
SHPRH-206ENST00000438092 RBM23Q86U06 439 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms