RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DMAP1Q9NPF5 467 aaPredicted RBP8.24□□□□□ -1.09
VPS50-203ENST00000436177 KRT82Q9NSB4 513 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 EBF1Q9UH73 591 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 SH3BP1Q9Y3L3 701 aa8.24□□□□□ -1.09
VPS50-203ENST00000436177 DNAH14Q0VDD8 3507 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 PVALEFA0A1B0GWK0 134 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 CLDN5O00501 218 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 KHNYNO15037 678 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 DCLK1O15075 740 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 KIF20AO95235 890 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 KAT7O95251 611 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 KLF8O95600 359 aaPredicted RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 OAS1P00973 400 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 HOXC13P31276 330 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 HOXD13P35453 343 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 EIF2DP41214 584 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 DHPSP49366 369 aaPredicted RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 MRPS21P82921 87 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 KDSRQ06136 332 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 NCOA4Q13772 614 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 BYSLQ13895 437 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 DHCR24Q15392 516 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 ST3GAL2Q16842 350 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 KNOP1Q1ED39 458 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 HSF5Q4G112 596 aaPredicted RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 EOGTQ5NDL2 527 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 HECTD3Q5T447 861 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 SHC4Q6S5L8 630 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 TRMT11Q7Z4G4 463 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 LIMS2Q7Z4I7 341 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 FAM35AQ86V20 835 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 PGBD3Q8N328 593 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 SCFD1Q8WVM8 642 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 OVCA2Q8WZ82 227 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 OTUB2Q96DC9 234 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 CNOT6LQ96LI5 555 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 PNKPQ96T60 521 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 LINC00597Q9H2U6 94 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 DPEP3Q9H4B8 488 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 SMOC1Q9H4F8 434 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 SMYD3Q9H7B4 428 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 ARHGEF4Q9NR80 690 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 POLR3BQ9NW08 1133 aaPredicted RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 LSM7Q9UK45 103 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 CFAP45Q9UL16 551 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 INVSQ9Y283 1065 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 FRMD4BQ9Y2L6 1034 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 FCF1Q9Y324 198 aaKnown RBP8.23□□□□□ -1.09
VPS50-203ENST00000436177 TCHHQ07283 1943 aa8.23□□□□□ -1.09
VPS50-203ENST00000436177 USP24Q9UPU5 2620 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 BCLAF3A2AJT9 711 aaKnown RBP8.22□□□□□ -1.09
VPS50-203ENST00000436177 TBC1D3BA6NDS4 549 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 TGFB1I1O43294 461 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 AP1G2O75843 785 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 STAU1O95793 577 aaKnown RBP8.22□□□□□ -1.09
VPS50-203ENST00000436177 ZSCAN22P10073 491 aaPredicted RBP8.22□□□□□ -1.09
VPS50-203ENST00000436177 IRF1P10914 325 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 OPRD1P41143 372 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 GRIA2P42262 883 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 PIK3CAP42336 1068 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 DPP6P42658 865 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 NOVA1P51513 510 aaKnown RBP8.22□□□□□ -1.09
VPS50-203ENST00000436177 SLC5A3P53794 718 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 GAD2Q05329 585 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 CRY1Q16526 586 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 BMT2Q1RMZ1 405 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 ANO4Q32M45 955 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 PMS2CLQ68D20 193 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 SCARA3Q6AZY7 606 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 ATL3Q6DD88 541 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 TCEAL6Q6IPX3 200 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 LPCAT2Q7L5N7 544 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 C12orf56Q8IXR9 622 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 ALLCQ8N6M5 410 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 TXNDC5Q8NBS9 432 aaKnown RBP8.22□□□□□ -1.09
VPS50-203ENST00000436177 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 HMGB4Q8WW32 186 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 TCEAL3Q969E4 200 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 B3GNT5Q9BYG0 378 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 DUSP15Q9H1R2 295 aaPredicted RBP8.22□□□□□ -1.09
VPS50-203ENST00000436177 DEC1Q9P2X7 70 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 IGF2RP11717 2491 aa8.22□□□□□ -1.09
VPS50-203ENST00000436177 TCRBV21S2A2A0A5A6 115 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 COCHO43405 550 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 TLR5O60602 858 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 OLFM2O95897 454 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 F13A1P00488 732 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 CST3P01034 146 aaPredicted RBP8.21□□□□□ -1.1
VPS50-203ENST00000436177 RPN1P04843 607 aaKnown RBP8.21□□□□□ -1.1
VPS50-203ENST00000436177 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 FAM200BP0CF97 657 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 CASP1P29466 404 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 TNFRSF4P43489 277 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 CASP4P49662 377 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 TUBP50607 506 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 ATXN3P54252 364 aaPredicted RBP8.21□□□□□ -1.1
VPS50-203ENST00000436177 CUL4BQ13620 913 aa8.21□□□□□ -1.1
VPS50-203ENST00000436177 SGSM1Q2NKQ1 1148 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms