RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 PCDHA3Q9Y5H8 950 aa11.88□□□□□ -0.51
PCOTH-203ENST00000435039 C2CD2LO14523 706 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ADAM12O43184 909 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 LILRB3O75022 631 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 LRCH4O75427 683 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ABLIM3O94929 683 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 RTN3O95197 1032 aaPredicted RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 RB1P06400 928 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 HAPLN1P10915 354 aaPredicted RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 OR1D2P34982 312 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 BMPR1AP36894 532 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 DNA2P51530 1060 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ARPP19P56211 112 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 RPL10AP62906 217 aaKnown RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 SLC25A11Q02978 314 aaKnown RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 RAB33AQ14088 237 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ADGRE1Q14246 886 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 RAB30Q15771 203 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 CLUL1Q15846 466 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 TJAP1Q5JTD0 557 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 TRNP1Q6NT89 227 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ZNF572Q7Z3I7 529 aaPredicted RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 SCN4BQ8IWT1 228 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 CEP112Q8N8E3 955 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ATAD1Q8NBU5 361 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 KRT35Q92764 455 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 GOLGA1Q92805 767 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 FAM149B1Q96BN6 582 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 SEPT5Q99719 369 aaPredicted RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 C11orf84Q9BUA3 381 aaPredicted RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 FBXO44Q9H4M3 255 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 RRN3Q9NYV6 651 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 STAP1Q9ULZ2 295 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
PCOTH-203ENST00000435039 ZNF638Q14966 1978 aaKnown RBP11.87□□□□□ -0.51
PCOTH-203ENST00000435039 PRRC2BQ5JSZ5 2229 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 FAM92AA1XBS5 289 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 RIOK3O14730 519 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 GRAP2O75791 330 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 RNF8O76064 485 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 SLU7O95391 586 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 LTFP02788 710 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 USP17L7P0C7H9 530 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 ATF2P15336 505 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 NOS2P35228 1153 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 MATKP42679 507 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 MARCKSL1P49006 195 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 TUFMP49411 452 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 PEX5P50542 639 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 RWDD2BP57060 319 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 YWHAZP63104 245 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 TAF5Q15542 800 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 HADHQ16836 314 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 MGAT5BQ3V5L5 792 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 CCDC14Q49A88 953 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 SEL1L2Q5TEA6 688 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 CCDC181Q5TID7 509 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 DCAF12L1Q5VU92 463 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 CC2D1AQ6P1N0 951 aaPredicted RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 DENND5BQ6ZUT9 1274 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 STRADAQ7RTN6 431 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 CREG2Q8IUH2 290 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 KATNAL2Q8IYT4 538 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 NUP93Q8N1F7 819 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 ARHGAP18Q8N392 663 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 TTC9BQ8N6N2 239 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 MNS1Q8NEH6 495 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 COG1Q8WTW3 980 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 FAM172AQ8WUF8 416 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 PPM1EQ8WY54 764 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 ALG3Q92685 438 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 PSMB7Q99436 277 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 DDX23Q9BUQ8 820 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 CRISPLD1Q9H336 500 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 IL37Q9NZH6 218 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 EHD2Q9NZN4 543 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 MSRAQ9UJ68 235 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 TTC7AQ9ULT0 858 aaPredicted RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 SCML2Q9UQR0 700 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 USTQ9Y2C2 406 aa11.86□□□□□ -0.51
PCOTH-203ENST00000435039 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
PCOTH-203ENST00000435039 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 YJEFN3A6XGL0 299 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 E7ENQ6 273 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 PGRMC1O00264 195 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TEX28O15482 410 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 SRGAP2O75044 1071 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 ADH1AP07327 375 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 CA3P07451 260 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 KRT7P08729 469 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 ATF6P18850 670 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms