RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 NMUR1Q9HB89 426 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 ARHGEF3Q9NR81 526 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 MYOFQ9NZM1 2061 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 MED7O43513 233 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 ABL1P00519 1130 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 TKTL1P51854 596 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 MLLT6P55198 1093 aaPredicted RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 STARD6P59095 220 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 UBXN1Q04323 297 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 SYCP1Q15431 976 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 MLF2Q15773 248 aaPredicted RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 KLHDC10Q6PID8 442 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 YAF2Q8IY57 180 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 FBXL6Q8N531 539 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 SH3RF2Q8TEC5 729 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 SECISBP2LQ93073 1101 aaKnown RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 ZFRQ96KR1 1074 aaKnown RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 DDX23Q9BUQ8 820 aaKnown RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 RTN4Q9NQC3 1192 aaKnown RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 THG1LQ9NWX6 298 aaKnown RBP19.33■□□□□ 0.68
HLA-F-220ENST00000434407 CLIC5Q9NZA1 410 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 CA14Q9ULX7 337 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 PCDHGC3Q9UN70 934 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 KMT2EQ8IZD2 1858 aa19.33■□□□□ 0.68
HLA-F-220ENST00000434407 MIA3Q5JRA6 1907 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 A0A1W2PQH9 124 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 SHISA7A6NL88 538 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 EPHB6O15197 1021 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 THAP12O43422 761 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 TLR5O60602 858 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 ZBED1O96006 694 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 PNMA6AP0CW24 399 aaPredicted RBP19.32■□□□□ 0.68
HLA-F-220ENST00000434407 USP8P40818 1118 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 PRKCQQ04759 706 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 PTK2Q05397 1052 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 RAPGEF1Q13905 1077 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 DENND1BQ6P3S1 775 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 LUZP1Q86V48 1076 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 STK32AQ8WU08 396 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 ULBP1Q9BZM6 244 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 LRRC4Q9HBW1 653 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 CNGB3Q9NQW8 809 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 CPQQ9Y646 472 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 CACNA1HO95180 2353 aa19.32■□□□□ 0.68
HLA-F-220ENST00000434407 WDFY4Q6ZS81 3184 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 F8VZ95 297 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 LEFTY2O00292 366 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 TEX33O43247 280 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 GLULP15104 373 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 JAM2P57087 298 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 BPIFB4P59827 614 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 ADIGQ0VDE8 80 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 MTF1Q14872 753 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 CWF19L1Q69YN2 538 aaKnown RBP19.31■□□□□ 0.68
HLA-F-220ENST00000434407 SLC47A2Q86VL8 602 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 ARHGAP18Q8N392 663 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 SHDQ96IW2 340 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 ZFYVE19Q96K21 471 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 HEBP1Q9NRV9 189 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 GKN1Q9NS71 199 aa19.31■□□□□ 0.68
HLA-F-220ENST00000434407 FAM207AQ9NSI2 230 aaPredicted RBP19.31■□□□□ 0.68
HLA-F-220ENST00000434407 COL4A3Q01955 1670 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 A0A1B0GTH6 734 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 TBX18O95935 607 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 MBL2P11226 248 aaPredicted RBP19.3■□□□□ 0.68
HLA-F-220ENST00000434407 RARGP13631 454 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 RGS7P49802 495 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 POLR2FP61218 127 aaKnown RBP19.3■□□□□ 0.68
HLA-F-220ENST00000434407 DDX42Q86XP3 938 aaKnown RBP eCLIP19.3■□□□□ 0.68
HLA-F-220ENST00000434407 OSCP1Q8WVF1 389 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 SLC4A5Q9BY07 1137 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 LHX5Q9H2C1 402 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 TBC1D17Q9HA65 648 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 HPS4Q9NQG7 708 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 CYTH4Q9UIA0 394 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 NAGPAQ9UK23 515 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 MUC6Q6W4X9 2439 aa19.3■□□□□ 0.68
HLA-F-220ENST00000434407 ATP5C1P36542 298 aaKnown RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 CLCN5P51795 746 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 DAOAP59103 153 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 PDGFRLQ15198 375 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 ASTLQ6HA08 431 aaPredicted RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 LRSAM1Q6UWE0 723 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 TMEM110Q86TL2 294 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 WDTC1Q8N5D0 677 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 IRGQQ8WZA9 623 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 DDX1Q92499 740 aaKnown RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 NDRG1Q92597 394 aaKnown RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 NAP1L5Q96NT1 182 aaPredicted RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 CDK5RAP1Q96SZ6 601 aaKnown RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 KLF16Q9BXK1 252 aaPredicted RBP19.29■□□□□ 0.68
HLA-F-220ENST00000434407 SMPD4Q9NXE4 827 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 CACNA1IQ9P0X4 2223 aa19.29■□□□□ 0.68
HLA-F-220ENST00000434407 FBXO21O94952 628 aa19.28■□□□□ 0.68
HLA-F-220ENST00000434407 RALAP11233 206 aa19.28■□□□□ 0.68
HLA-F-220ENST00000434407 CYP11B1P15538 503 aa19.28■□□□□ 0.68
HLA-F-220ENST00000434407 ACADSBP45954 432 aa19.28■□□□□ 0.68
HLA-F-220ENST00000434407 YWHAGP61981 247 aaKnown RBP eCLIP19.28■□□□□ 0.68
HLA-F-220ENST00000434407 TNK2Q07912 1038 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms