RNA–Protein interactions for RNA: ENST00000433436.6

CLTA-204, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-204ENST00000433436 FHOD1Q9Y613 1164 aa24.27■■□□□ 1.48
CLTA-204ENST00000433436 PIAS3Q9Y6X2 628 aa24.27■■□□□ 1.48
CLTA-204ENST00000433436 MED7O43513 233 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 TBX18O95935 607 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 COL9A1P20849 921 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 RGS7P49802 495 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 SLC35F5Q8WV83 523 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 ZNF606Q8WXB4 792 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 NDRG1Q92597 394 aaKnown RBP24.26■■□□□ 1.47
CLTA-204ENST00000433436 ULBP1Q9BZM6 244 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 EBF3Q9H4W6 596 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 DUS2Q9NX74 493 aaKnown RBP24.26■■□□□ 1.47
CLTA-204ENST00000433436 RAPGEFL1Q9UHV5 662 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 NUDT5Q9UKK9 219 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 WNT6Q9Y6F9 365 aa24.26■■□□□ 1.47
CLTA-204ENST00000433436 TICRRQ7Z2Z1 1910 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 KANSL1LA0AUZ9 987 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 PIK3R2O00459 728 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 ZBED1O96006 694 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 RARGP13631 454 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 LCP1P13796 627 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 ARSAP15289 507 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 TCF3P15923 654 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 AOC1P19801 751 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 SOX9P48436 509 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 ADIGQ0VDE8 80 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 DRAP1Q14919 205 aaPredicted RBP24.25■■□□□ 1.47
CLTA-204ENST00000433436 ZSCAN23Q3MJ62 389 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 PMF1Q6P1K2 205 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 DENND1BQ6P3S1 775 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 ZNF852Q6ZMS4 543 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 SIX6OS1Q8N1H7 587 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 KCTD13Q8WZ19 329 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 DDX23Q9BUQ8 820 aaKnown RBP24.25■■□□□ 1.47
CLTA-204ENST00000433436 CYLDQ9NQC7 956 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 CFAP97Q9P2B7 532 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 SIT1Q9Y3P8 196 aa24.25■■□□□ 1.47
CLTA-204ENST00000433436 MTF2Q9Y483 593 aaPredicted RBP24.25■■□□□ 1.47
CLTA-204ENST00000433436 MYO16Q9Y6X6 1858 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 LRRC10BA6NIK2 292 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 LGALS16A8MUM7 142 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 SCAMP3O14828 347 aaKnown RBP24.24■■□□□ 1.47
CLTA-204ENST00000433436 UCHL3P15374 230 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 ATP5C1P36542 298 aaKnown RBP24.24■■□□□ 1.47
CLTA-204ENST00000433436 PSEN1P49768 467 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 UBXN1Q04323 297 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 UBXN2BQ14CS0 331 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 PDGFRLQ15198 375 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 ITPRIPL2Q3MIP1 535 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 APTXQ7Z2E3 356 aaKnown RBP24.24■■□□□ 1.47
CLTA-204ENST00000433436 OSCP1Q8WVF1 389 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 PCMTD1Q96MG8 357 aaPredicted RBP24.24■■□□□ 1.47
CLTA-204ENST00000433436 LINC00597Q9H2U6 94 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 HPS4Q9NQG7 708 aa24.24■■□□□ 1.47
CLTA-204ENST00000433436 FAM207AQ9NSI2 230 aaPredicted RBP24.24■■□□□ 1.47
CLTA-204ENST00000433436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.24■■□□□ 1.47
CLTA-204ENST00000433436 SHISA7A6NL88 538 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 FAM170BA6NMN3 283 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 GABBR2O75899 941 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 DCNP07585 359 aaKnown RBP24.23■■□□□ 1.47
CLTA-204ENST00000433436 RALAP11233 206 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 CLCN1P35523 988 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 IFNAR2P48551 515 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 YWHAGP61981 247 aaKnown RBP eCLIP24.23■■□□□ 1.47
CLTA-204ENST00000433436 PTK2Q05397 1052 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 RUNX3Q13761 415 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 SYCP1Q15431 976 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 C10orf120Q5SQS8 335 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 PM20D1Q6GTS8 502 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 ARHGAP18Q8N392 663 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 ZFRQ96KR1 1074 aaKnown RBP24.23■■□□□ 1.47
CLTA-204ENST00000433436 NAA15Q9BXJ9 866 aaKnown RBP24.23■■□□□ 1.47
CLTA-204ENST00000433436 PLCB1Q9NQ66 1216 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 NDRG2Q9UN36 371 aaKnown RBP24.23■■□□□ 1.47
CLTA-204ENST00000433436 HCN4Q9Y3Q4 1203 aa24.23■■□□□ 1.47
CLTA-204ENST00000433436 OTOL1A6NHN0 477 aaPredicted RBP24.22■■□□□ 1.47
CLTA-204ENST00000433436 MAN2B1O00754 1011 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 MDM4O15151 490 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 IRF1P10914 325 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 GLULP15104 373 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 GPD2P43304 727 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 IQCB1Q15051 598 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 SLC47A2Q86VL8 602 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 DDX42Q86XP3 938 aaKnown RBP eCLIP24.22■■□□□ 1.47
CLTA-204ENST00000433436 FAM71AQ8IYT1 594 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 PJA1Q8NG27 643 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 FAM3CQ92520 227 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 C8orf33Q9H7E9 229 aaPredicted RBP24.22■■□□□ 1.47
CLTA-204ENST00000433436 CBX8Q9HC52 389 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 LTB4R2Q9NPC1 389 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 CLIC5Q9NZA1 410 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 SIK3Q9Y2K2 1263 aa24.22■■□□□ 1.47
CLTA-204ENST00000433436 MRPS17Q9Y2R5 130 aaKnown RBP24.22■■□□□ 1.47
CLTA-204ENST00000433436 COL4A2P08572 1712 aa24.21■■□□□ 1.47
CLTA-204ENST00000433436 SPECC1L-ADORA2AF8WAN1 911 aa24.21■■□□□ 1.47
CLTA-204ENST00000433436 MLLT6P55198 1093 aaPredicted RBP24.21■■□□□ 1.47
CLTA-204ENST00000433436 POLR2FP61218 127 aaKnown RBP24.21■■□□□ 1.47
CLTA-204ENST00000433436 EML3Q32P44 896 aa24.21■■□□□ 1.47
CLTA-204ENST00000433436 TADA2BQ86TJ2 420 aa24.21■■□□□ 1.47
CLTA-204ENST00000433436 HSFY1Q96LI6 401 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms