RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SLC7A14Q8TBB6 771 aa27.74■■■□□ 2.03
TMEM248-205ENST00000433271 TTLL2Q9BWV7 592 aa27.74■■■□□ 2.03
TMEM248-205ENST00000433271 POPDC2Q9HBU9 364 aa27.74■■■□□ 2.03
TMEM248-205ENST00000433271 PROSCO94903 275 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 CSH1P0DML2 217 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 CSH2P0DML3 217 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 TNNT1P13805 278 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 PDGFRAP16234 1089 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 ZNF143P52747 638 aaPredicted RBP27.73■■■□□ 2.03
TMEM248-205ENST00000433271 PIGHQ14442 188 aaPredicted RBP27.73■■■□□ 2.03
TMEM248-205ENST00000433271 VEPH1Q14D04 833 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 PTPROQ16827 1216 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 RXFP2Q8WXD0 754 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 GOLGA1Q92805 767 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 MRPL38Q96DV4 380 aaKnown RBP27.73■■■□□ 2.03
TMEM248-205ENST00000433271 GOLPH3Q9H4A6 298 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 PLEKHA4Q9H4M7 779 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 COLQQ9Y215 455 aaPredicted RBP27.73■■■□□ 2.03
TMEM248-205ENST00000433271 ALG6Q9Y672 507 aa27.73■■■□□ 2.03
TMEM248-205ENST00000433271 LTFP02788 710 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 GPD1P21695 349 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 MAN1A1P33908 653 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 ZNF252P-AS1Q0IIN9 211 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 MTMR3Q13615 1198 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 TRNP1Q6NT89 227 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 HFE2Q6ZVN8 426 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 MON1AQ86VX9 555 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 NIPA2Q8N8Q9 360 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 SLC22A17Q8WUG5 538 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 SLC2A13Q96QE2 648 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 TRIM62Q9BVG3 475 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 ZNF576Q9H609 170 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 DNAI1Q9UI46 699 aa27.72■■■□□ 2.03
TMEM248-205ENST00000433271 TMEM110-MUSTN1A8MSY1 372 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 DAB1O75553 588 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 C8AP07357 584 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 PSMA2P25787 234 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 MATKP42679 507 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 SLC1A1P43005 524 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 BSPRYQ5W0U4 402 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 SYT10Q6XYQ8 523 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 BEND5Q7L4P6 421 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.71■■■□□ 2.03
TMEM248-205ENST00000433271 FBXO32Q969P5 355 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 MYRFLQ96LU7 910 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 CNPY3Q9BT09 278 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.71■■■□□ 2.03
TMEM248-205ENST00000433271 JRKLQ9Y4A0 524 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 PLXNA3P51805 1871 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 GREB1Q4ZG55 1949 aa27.71■■■□□ 2.03
TMEM248-205ENST00000433271 RFXAPO00287 272 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 DPYSL4O14531 572 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 PER2O15055 1255 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 FYNP06241 537 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 YWHAGP61981 247 aaKnown RBP eCLIP27.7■■■□□ 2.03
TMEM248-205ENST00000433271 ACAP1Q15027 740 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 DEFB106AQ8N104 65 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 ARHGAP18Q8N392 663 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 HDAC7Q8WUI4 952 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 UBE2Q2Q8WVN8 375 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 DDX23Q9BUQ8 820 aaKnown RBP27.7■■■□□ 2.03
TMEM248-205ENST00000433271 TLE6Q9H808 572 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 ASB3Q9Y575 518 aa27.7■■■□□ 2.03
TMEM248-205ENST00000433271 FTCDO95954 541 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 HMGA1P17096 107 aaKnown RBP27.7■■■□□ 2.02
TMEM248-205ENST00000433271 COMTP21964 271 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 SDC4P31431 198 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 NOS2P35228 1153 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 TAF10Q12962 218 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 PEX26Q7Z412 305 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 ADGRD2Q7Z7M1 963 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 SCD5Q86SK9 330 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 RBM23Q86U06 439 aaKnown RBP27.7■■■□□ 2.02
TMEM248-205ENST00000433271 ITIH5Q86UX2 942 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 NT5DC3Q86UY8 548 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 PSMG2Q969U7 264 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 TRMT2BQ96GJ1 504 aaKnown RBP27.7■■■□□ 2.02
TMEM248-205ENST00000433271 SLITRK1Q96PX8 696 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 DPP7Q9UHL4 492 aa27.7■■■□□ 2.02
TMEM248-205ENST00000433271 MAGED2Q9UNF1 606 aaPredicted RBP27.7■■■□□ 2.02
TMEM248-205ENST00000433271 LRG1P02750 347 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 PTPN9P43378 593 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 TAF12Q16514 161 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 CCDC14Q49A88 953 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 DCAF6Q58WW2 860 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 DNAJB7Q7Z6W7 309 aaPredicted RBP27.69■■■□□ 2.02
TMEM248-205ENST00000433271 CFAP57Q96MR6 1250 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 MAN1C1Q9NR34 630 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 ABCC13Q9NSE7 274 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 AMFRQ9UKV5 643 aa27.69■■■□□ 2.02
TMEM248-205ENST00000433271 CAPN9O14815 690 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 CASQ1P31415 396 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 PSEN1P49768 467 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 DUSP6Q16828 381 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 MEI1Q5TIA1 1274 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 TLR8Q9NR97 1041 aaKnown RBP27.68■■■□□ 2.02
TMEM248-205ENST00000433271 GMIPQ9P107 970 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 NAALADL1Q9UQQ1 740 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 HYOU1Q9Y4L1 999 aa27.68■■■□□ 2.02
TMEM248-205ENST00000433271 MYO9BQ13459 2157 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms