RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 RPL34P49207 117 aaKnown RBP13.4□□□□□ -0.26
DDX56-204ENST00000431640 BCAT1P54687 386 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 CDH6P55285 790 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 EIF3EP60228 445 aaKnown RBP13.4□□□□□ -0.26
DDX56-204ENST00000431640 DYNLT1P63172 113 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 BST2Q10589 180 aaKnown RBP13.4□□□□□ -0.26
DDX56-204ENST00000431640 LRRC26Q2I0M4 334 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 CCDC14Q49A88 953 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 UBXN11Q5T124 520 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 OLFML1Q6UWY5 402 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 CPLX4Q7Z7G2 160 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 RPAINQ86UA6 219 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 EXOC3L1Q86VI1 746 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
DDX56-204ENST00000431640 ARHGEF2Q92974 986 aaKnown RBP13.4□□□□□ -0.26
DDX56-204ENST00000431640 HAUS1Q96CS2 278 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 HSFY1Q96LI6 401 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 CALN1Q9BXU9 219 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 CCDC134Q9H6E4 229 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 SAYSD1Q9NPB0 183 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 HES2Q9Y543 173 aa13.4□□□□□ -0.26
DDX56-204ENST00000431640 SCN5AQ14524 2016 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 C5orf60A6NFR6 353 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 M0QZ92 97 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 PPEF2O14830 753 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
DDX56-204ENST00000431640 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 PECAM1P16284 738 aaPredicted RBP13.39□□□□□ -0.27
DDX56-204ENST00000431640 THPOP40225 353 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 PTPN9P43378 593 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 RGS7P49802 495 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 ARL4CP56559 192 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 SLC8A3P57103 927 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 CORO7P57737 925 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 PDE4CQ08493 712 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 KRT81Q14533 505 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 CCDC142Q17RM4 750 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
DDX56-204ENST00000431640 LIMS2Q7Z4I7 341 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 YTHDF3Q7Z739 585 aaKnown RBP13.39□□□□□ -0.27
DDX56-204ENST00000431640 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 HACE1Q8IYU2 909 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 ANKLE1Q8NAG6 615 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 P3H4Q92791 437 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 CHMP6Q96FZ7 201 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 RNF157Q96PX1 679 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 APOL6Q9BWW8 343 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 RABEP2Q9H5N1 569 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 FAM169AQ9Y6X4 670 aa13.39□□□□□ -0.27
DDX56-204ENST00000431640 TRIP11Q15643 1979 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 CFAP69A5D8W1 941 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 MYO1CO00159 1063 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 TULP2O00295 520 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 MDM4O15151 490 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 CD48P09326 243 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 RBP3P10745 1247 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 CKBP12277 381 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 ETS1P14921 441 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 TSHRP16473 764 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 TGM2P21980 687 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 WARSP23381 471 aaKnown RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 LRPAP1P30533 357 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 PHBP35232 272 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 DPYSL3Q14195 570 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 GPNMBQ14956 572 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 RASA2Q15283 850 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 EFHC1Q5JVL4 640 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 GLRA4Q5JXX5 417 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 UBAP2Q5T6F2 1119 aaKnown RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 GKAP1Q5VSY0 366 aaPredicted RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 C4orf22Q6V702 233 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 ANKRD33Q7Z3H0 272 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 PRUNE1Q86TP1 453 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 SCUBE3Q8IX30 993 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 GLIS1Q8NBF1 620 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 MDM1Q8TC05 714 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 SPATA18Q8TC71 538 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 CXCL16Q9H2A7 254 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 C11orf49Q9H6J7 331 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 AGO3Q9H9G7 860 aaKnown RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 PRDM16Q9HAZ2 1276 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 CHST12Q9NRB3 414 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX56-204ENST00000431640 FAM49BQ9NUQ9 324 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 DNAJC17Q9NVM6 304 aaKnown RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 NAALADL1Q9UQQ1 740 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 FARP1Q9Y4F1 1045 aaPredicted RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 IPPQ9Y573 584 aa13.38□□□□□ -0.27
DDX56-204ENST00000431640 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
DDX56-204ENST00000431640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 PAPSS1O43252 624 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 ZFXP17010 805 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms