RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RGS2P41220 211 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 MAGEA6P43360 314 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TAF6P49848 677 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 NRLP54845 237 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 HUNKP57058 714 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 SNX16P57768 344 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 DPYSL2Q16555 572 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 FAM228AQ86W67 206 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 MAP7D3Q8IWC1 876 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TOP6BLQ8N6T0 577 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 DENND1AQ8TEH3 1009 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 HSFY1Q96LI6 401 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 PPP1R10Q96QC0 940 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 GPATCH2LQ9NWQ4 482 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 MTMR10Q9NXD2 777 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 RABGEF1Q9UJ41 708 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 BCLAF3A2AJT9 711 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 KIAA0754O94854 1291 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 FAM163BP0C2L3 166 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 LILRA4P59901 499 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 ITIH4Q14624 930 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TMED2Q15363 201 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 FSCN1Q16658 493 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 SPRED3Q2MJR0 410 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 SV2CQ496J9 727 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 LACTB2Q53H82 288 aaPredicted RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 BNIPLQ7Z465 357 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 SRRM1Q8IYB3 904 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 OTUD6BQ8N6M0 293 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TRPV1Q8NER1 839 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 SOCS4Q8WXH5 440 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 PPM1EQ8WY54 764 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 CCT6BQ92526 530 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 P3H4Q92791 437 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 MAK16Q9BXY0 300 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 AP5M1Q9H0R1 490 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 GOLGA2P5Q9HBQ8 144 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
HOXC4-202ENST00000430889 TBK1Q9UHD2 729 aa14.55□□□□□ -0.08
HOXC4-202ENST00000430889 GOLGA8MH3BSY2 632 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 APOL1O14791 398 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 CHADO15335 359 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 CYP2B6P20813 491 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 L1CAMP32004 1257 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 ACADSBP45954 432 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 IFNAR2P48551 515 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 KRT81Q14533 505 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 LRRC14Q15048 493 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 HP1BP3Q5SSJ5 553 aaPredicted RBP14.54□□□□□ -0.08
HOXC4-202ENST00000430889 ATP11CQ8NB49 1132 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 CCDC197Q8NCU1 140 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 APPL2Q8NEU8 664 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 MZB1Q8WU39 189 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 HNRNPABQ99729 332 aaKnown RBP14.54□□□□□ -0.08
HOXC4-202ENST00000430889 ACSS3Q9H6R3 686 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 USP3Q9Y6I4 520 aa14.54□□□□□ -0.08
HOXC4-202ENST00000430889 CFAP69A5D8W1 941 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 MYADML2A6NDP7 307 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 RASA4BC9J798 803 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 GABRDO14764 452 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 XPO1O14980 1071 aaKnown RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 RASA4O43374 803 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 PDGFRBP09619 1106 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 ADORA2BP29275 332 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 CTGFP29279 349 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 LIG3P49916 1009 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 WDR4P57081 412 aaKnown RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 RNASELQ05823 741 aaKnown RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 ADCY1Q08828 1119 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 PKN2Q16513 984 aaKnown RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 OTUD1Q5VV17 481 aaPredicted RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 TAF2Q6P1X5 1199 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 DARS2Q6PI48 645 aaKnown RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 ZC3H18Q86VM9 953 aaKnown RBP14.53□□□□□ -0.08
HOXC4-202ENST00000430889 IFNL1Q8IU54 200 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 ANKMY2Q8IV38 441 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 ADGRF2Q8IZF7 708 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 SLC2A14Q8TDB8 520 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 CABS1Q96KC9 395 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 SNX25Q9H3E2 840 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 NRDE2Q9H7Z3 1164 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 VPS37BQ9H9H4 285 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 SENP1Q9P0U3 644 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 PAK5Q9P286 719 aa14.53□□□□□ -0.08
HOXC4-202ENST00000430889 SNX3O60493 162 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 DUSP11O75319 330 aaKnown RBP14.52□□□□□ -0.08
HOXC4-202ENST00000430889 ASMTLO95671 621 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 GHRP10912 638 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 GNAT1P11488 350 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 ATXN1P54253 815 aaKnown RBP14.52□□□□□ -0.08
HOXC4-202ENST00000430889 NKX3-2P78367 333 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 ACTN3Q08043 901 aaPredicted RBP14.52□□□□□ -0.08
HOXC4-202ENST00000430889 SCYL2Q6P3W7 929 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 C1orf228Q6PIY5 440 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 ADGRD1Q6QNK2 874 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 PAQR9Q6ZVX9 377 aa14.52□□□□□ -0.08
HOXC4-202ENST00000430889 STRADAQ7RTN6 431 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms