RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RAB41Q5JT25 222 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 KLHDC10Q6PID8 442 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ZC3H14Q6PJT7 736 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 RRAGAQ7L523 313 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ENOSF1Q7L5Y1 443 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 TADA2BQ86TJ2 420 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ALYREFQ86V81 257 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 PIGZQ86VD9 579 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 TTC30AQ86WT1 665 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 IRF2BP1Q8IU81 584 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ARHGEF19Q8IW93 802 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 MAML2Q8IZL2 1156 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ADGRG2Q8IZP9 1017 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ARHGAP18Q8N392 663 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ZNF276Q8N554 614 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 GPT2Q8TD30 523 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 KAT5Q92993 513 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 OTUB2Q96DC9 234 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 CDK5RAP1Q96SZ6 601 aaKnown RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 LINC00597Q9H2U6 94 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 PRMT8Q9NR22 394 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-207ENST00000430858 CLIC5Q9NZA1 410 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 SH3BP1Q9Y3L3 701 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 TICRRQ7Z2Z1 1910 aa10.34□□□□□ -0.75
HDAC6-207ENST00000430858 ANAPC1Q9H1A4 1944 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 A0A1W2PQH9 124 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 SETSIPP0DME0 302 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 RARGP13631 454 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 PRKCSHP14314 528 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 DRD1P21728 446 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 PGFP49763 221 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 CSTF1Q05048 431 aaKnown RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 PDE4CQ08493 712 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 GOLGA8FQ08AF8 430 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 GOLGA8DPQ0D2H9 430 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 CNGA2Q16280 664 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 MAN2A1Q16706 1144 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 EXOC3L4Q17RC7 722 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 FBXO43Q4G163 708 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 LCLAT1Q6UWP7 414 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 GBP6Q6ZN66 633 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 RBM43Q6ZSC3 357 aaKnown RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 SCD5Q86SK9 330 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 SPEM1Q8N4L4 309 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 RBBP8NLQ8NC74 664 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 CHFRQ96EP1 664 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 KREMEN1Q96MU8 473 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 P2RY13Q9BPV8 354 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 FAM126AQ9BYI3 521 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 NMUR1Q9HB89 426 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 LRRC4Q9HBW1 653 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 UBE2TQ9NPD8 197 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 RBM12Q9NTZ6 932 aaKnown RBP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC6-207ENST00000430858 OSER1Q9NX31 292 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 DNMT3LQ9UJW3 386 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 NAGPAQ9UK23 515 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 CNTN6Q9UQ52 1028 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
HDAC6-207ENST00000430858 WDFY4Q6ZS81 3184 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 KIF26AQ9ULI4 1882 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 RNF225M0QZC1 329 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 TBX18O95935 607 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 MBD3O95983 291 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 ZBED1O96006 694 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 ADH1CP00326 375 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 CYP17A1P05093 508 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 CXCL12P48061 93 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 GALK1P51570 392 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 TKTL1P51854 596 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 ZNF132P52740 706 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 MFAP3P55082 362 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 GAS6Q14393 721 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 DHCR24Q15392 516 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 PM20D1Q6GTS8 502 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 FSTL4Q6MZW2 842 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 TRIM65Q6PJ69 517 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 Q6ZS52 159 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 HTR3DQ70Z44 454 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 UBA3Q8TBC4 463 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 ENOX1Q8TC92 643 aaKnown RBP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 KCTD13Q8WZ19 329 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 TFAP2BQ92481 460 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 CD101Q93033 1021 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 NKD2Q969F2 451 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 CRACR2AQ9BSW2 395 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 KLF16Q9BXK1 252 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 MIA3Q5JRA6 1907 aa10.32□□□□□ -0.76
HDAC6-207ENST00000430858 ZNF638Q14966 1978 aaKnown RBP10.32□□□□□ -0.76
HDAC6-207ENST00000430858 M0QYV0 167 aa10.31□□□□□ -0.76
HDAC6-207ENST00000430858 TULP2O00295 520 aa10.31□□□□□ -0.76
HDAC6-207ENST00000430858 SCAMP3O14828 347 aaKnown RBP10.31□□□□□ -0.76
HDAC6-207ENST00000430858 GFRA3O60609 400 aa10.31□□□□□ -0.76
HDAC6-207ENST00000430858 ATG13O75143 517 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms