RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 RFX8Q6ZV50 586 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 XYLT1Q86Y38 959 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 TMPRSS6Q8IU80 811 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 NIFKQ9BYG3 293 aaKnown RBP15.63■□□□□ 0.09
LINC00839-202ENST00000429940 RSAD1Q9HA92 442 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 NXF1Q9UBU9 619 aaKnown RBP15.63■□□□□ 0.09
LINC00839-202ENST00000429940 USP18Q9UMW8 372 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 WASF2Q9Y6W5 498 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.63■□□□□ 0.09
LINC00839-202ENST00000429940 CHADO15335 359 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 TOM1L1O75674 476 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 KRT37O76014 449 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 TRUB2O95900 331 aaKnown RBP15.63■□□□□ 0.09
LINC00839-202ENST00000429940 ERBB2P04626 1255 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 GNAT1P11488 350 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 RAP1GAPP47736 663 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 MMRN1Q13201 1228 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 NOMO1Q15155 1222 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 OR52E8Q6IFG1 317 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 TRIM42Q8IWZ5 723 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 SMC1BQ8NDV3 1235 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 REPS2Q8NFH8 660 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 MRPL4Q9BYD3 311 aaKnown RBP15.63■□□□□ 0.09
LINC00839-202ENST00000429940 PNPLA8Q9NP80 782 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 WDR35Q9P2L0 1181 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 PPARGC1AQ9UBK2 798 aaKnown RBP15.63■□□□□ 0.09
LINC00839-202ENST00000429940 TTLL3Q9Y4R7 772 aa15.63■□□□□ 0.09
LINC00839-202ENST00000429940 CAPN14A8MX76 684 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 MAGEC1O60732 1142 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 SNRPAP09012 282 aaKnown RBP15.62■□□□□ 0.09
LINC00839-202ENST00000429940 TMPRSS15P98073 1019 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 BST1Q10588 318 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 MDH1BQ5I0G3 518 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 FAM182AQ5T1J6 154 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 RNF220Q5VTB9 566 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 ATG16L1Q676U5 607 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 TREML1Q86YW5 311 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 C7orf26Q96N11 449 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 ZNF184Q99676 751 aaPredicted RBP15.62■□□□□ 0.09
LINC00839-202ENST00000429940 XYLT2Q9H1B5 865 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 PAPOLBQ9NRJ5 636 aaKnown RBP15.62■□□□□ 0.09
LINC00839-202ENST00000429940 RAB6BQ9NRW1 208 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 ZNF112Q9UJU3 913 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 ANGPTL2Q9UKU9 493 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 PLLPQ9Y342 182 aa15.62■□□□□ 0.09
LINC00839-202ENST00000429940 CCDC195A0A1B0GUA6 201 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 H7C0C1 242 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 OGTO15294 1046 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 MSCO60682 206 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PTPRAP18433 802 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ATP5OP48047 213 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PAPOLAP51003 745 aaKnown RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 YWHAZP63104 245 aaKnown RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ORC1Q13415 861 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ARID3BQ8IVW6 561 aaPredicted RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 FBXO27Q8NI29 283 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 E2F7Q96AV8 911 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 CDCA5Q96FF9 252 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ACAP3Q96P50 834 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PPP1R12CQ9BZL4 782 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 KRT82Q9NSB4 513 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ZNF214Q9UL59 606 aaPredicted RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 C1QAP02745 245 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 SURF1Q15526 300 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 CHI3L2Q15782 390 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 LGSNQ5TDP6 509 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 NET1Q7Z628 596 aaPredicted RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 RBM15BQ8NDT2 890 aaKnown RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PRPF31Q8WWY3 499 aaKnown RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 CLMNQ96JQ2 1002 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PEBP4Q96S96 227 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 SLC13A1Q9BZW2 595 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 WWP1Q9H0M0 922 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ZNF408Q9H9D4 720 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PIDD1Q9HB75 910 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ZC3H7BQ9UGR2 993 aaKnown RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 ZNF180Q9UJW8 692 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 CPSF3Q9UKF6 684 aaKnown RBP15.61■□□□□ 0.09
LINC00839-202ENST00000429940 C2CD2Q9Y426 696 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 PPME1Q9Y570 386 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 SCN4AP35499 1836 aa15.61■□□□□ 0.09
LINC00839-202ENST00000429940 CXorf49A8MYA2 514 aaPredicted RBP15.6■□□□□ 0.09
LINC00839-202ENST00000429940 F8W8V4 182 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 TNNC2P02585 160 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 HOXC6P09630 235 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 KITP10721 976 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
LINC00839-202ENST00000429940 EFNA5P52803 228 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 CACNA2D1P54289 1103 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 OAZ1P54368 228 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 CDH6P55285 790 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 MRPS5P82675 430 aaKnown RBP15.6■□□□□ 0.09
LINC00839-202ENST00000429940 SARNPP82979 210 aaKnown RBP15.6■□□□□ 0.09
LINC00839-202ENST00000429940 KDSRQ06136 332 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 HSF5Q4G112 596 aaPredicted RBP15.6■□□□□ 0.09
LINC00839-202ENST00000429940 C1orf228Q6PIY5 440 aa15.6■□□□□ 0.09
LINC00839-202ENST00000429940 SCUBE1Q8IWY4 988 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms