RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 FGF19O95750 216 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 CLCNKBP51801 687 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 CCZ1BP86790 482 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-207ENST00000429896 APBA1Q02410 837 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 SLMAPQ14BN4 828 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 TRMT10CQ7L0Y3 403 aaKnown RBP13.43□□□□□ -0.26
PTCH1-207ENST00000429896 DCLK3Q9C098 648 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 ATP8A1Q9Y2Q0 1164 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 SYN3O14994 580 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 SFSWAPQ12872 951 aaKnown RBP13.43□□□□□ -0.26
PTCH1-207ENST00000429896 RXFP2Q8WXD0 754 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 TCF25Q9BQ70 676 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 CAPS2Q9BXY5 557 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 ABCC13Q9NSE7 274 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 TMEM51Q9NW97 253 aa13.43□□□□□ -0.26
PTCH1-207ENST00000429896 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-207ENST00000429896 PCYT2Q99447 389 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 NTPCRQ9BSD7 190 aaKnown RBP13.42□□□□□ -0.26
PTCH1-207ENST00000429896 CINPQ9BW66 212 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-207ENST00000429896 COL6A1P12109 1028 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 SLC6A3Q01959 620 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 PYROXD1Q8WU10 500 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 XPO6Q96QU8 1125 aaKnown RBP13.42□□□□□ -0.26
PTCH1-207ENST00000429896 MRPL45Q9BRJ2 306 aaKnown RBP13.42□□□□□ -0.26
PTCH1-207ENST00000429896 ALG6Q9Y672 507 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 A0A087X0T9 212 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 PSTPIP1O43586 416 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 FAM228BP0C875 321 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 RRM1P23921 792 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 PPP1R2P1Q96PQ5 205 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 NFKBIZQ9BYH8 718 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 ETFBP38117 255 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 MSH2P43246 934 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 CNGA2Q16280 664 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 ULBP1Q9BZM6 244 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 ZNF197O14709 1029 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 PDK2Q15119 407 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 POPDC2Q9HBU9 364 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 CDY1Q9Y6F8 540 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 RHOCP08134 193 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 OXCT1P55809 520 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 SCUBE3Q8IX30 993 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 MCOLN2Q8IZK6 566 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 IKZF4Q9H2S9 585 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 SUFUQ9UMX1 484 aa13.42□□□□□ -0.26
PTCH1-207ENST00000429896 SPATA31D3P0C874 917 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 GPS1Q13098 491 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 SPATA31D4Q6ZUB0 917 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 NUP93Q8N1F7 819 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 TIAM2Q8IVF5 1701 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 FAM187BQ17R55 369 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 HECTD3Q5T447 861 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 SERINC5Q86VE9 423 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 FAM131BQ86XD5 332 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 ZNF513Q8N8E2 541 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 CCDC151A5D8V7 595 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 C3orf70A6NLC5 250 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 GOLGA8KD6RF30 607 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 LTFP02788 710 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 CAV1Q03135 178 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 LPIN1Q14693 890 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 CCDC137Q6PK04 289 aaKnown RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 EMC1Q8N766 993 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 BTBD6Q96KE9 485 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 PARD6BQ9BYG5 372 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 CFAP69A5D8W1 941 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 ATP1A1P05023 1023 aaKnown RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 ATP5C1P36542 298 aaKnown RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 PSEN1P49768 467 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 POLD3Q15054 466 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 GLE1Q53GS7 698 aaKnown RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 PIP4K2CQ8TBX8 421 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 SPPL2BQ8TCT7 592 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 ZCWPW1Q9H0M4 648 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 BFARQ9NZS9 450 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 AP4E1Q9UPM8 1137 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 TTC4O95801 387 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 VPS28Q9UK41 221 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 TTC7AQ9ULT0 858 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-207ENST00000429896 PHF24Q9UPV7 400 aa13.41□□□□□ -0.26
PTCH1-207ENST00000429896 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 MTSS1O43312 755 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 CUL1Q13616 776 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 KDELC2Q7Z4H8 507 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 ANKRD52Q8NB46 1076 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 NUDCD1Q96RS6 583 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 VCX3AQ9NNX9 186 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 SLC9A3R1O14745 358 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-207ENST00000429896 CCT5P48643 541 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 GPM6BQ13491 265 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 DEFB106AQ8N104 65 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 HIPK4Q8NE63 616 aa13.4□□□□□ -0.26
PTCH1-207ENST00000429896 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms