RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 NUP85Q9BW27 656 aa7.78□□□□□ -1.16
SYNPO2-202ENST00000429713 TBC1D10AQ9BXI6 508 aa7.78□□□□□ -1.16
SYNPO2-202ENST00000429713 SERPINB13Q9UIV8 391 aa7.78□□□□□ -1.16
SYNPO2-202ENST00000429713 CNOT11Q9UKZ1 510 aaKnown RBP7.78□□□□□ -1.16
SYNPO2-202ENST00000429713 ITGB4P16144 1822 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 LVRNQ6Q4G3 990 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 OR7A2PQ8NGA2 310 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 ACAT2Q9BWD1 397 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 PCIF1Q9H4Z3 704 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 DAPK2Q9UIK4 370 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 USP21Q9UK80 565 aa7.77□□□□□ -1.16
SYNPO2-202ENST00000429713 LOC102724428A0A0B4J2F2 783 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 EPN2O95208 641 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 HSPA4LO95757 839 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SIK1P57059 783 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ERVK-24P63145 666 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 COBLL1Q53SF7 1204 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 MTX3Q5HYI7 312 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TTC23Q5W5X9 447 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 GOLM1Q8NBJ4 401 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 OXNAD1Q96HP4 312 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ART5Q96L15 291 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TRIM8Q9BZR9 551 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CACNA1SQ13698 1873 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PTPRUQ92729 1446 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 IRF6O14896 467 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SIN3BO75182 1162 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TCF7P36402 384 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 FOXR1Q6PIV2 292 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RBM15BQ8NDT2 890 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 MIA3Q5JRA6 1907 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SCN2AQ99250 2005 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PLK4O00444 970 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PLCL1Q15111 1095 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ERFEQ4G0M1 354 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RUBCNLQ9H714 662 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 FER1L6Q2WGJ9 1857 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 KIAA1217Q5T5P2 1943 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 NBPF26B4DH59 902 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TM7SF2O76062 418 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SLC16A2P36021 539 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CYP4F2P78329 520 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CYP4F3Q08477 520 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SPCS2Q15005 226 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RASA2Q15283 850 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 P3H1Q32P28 736 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TMC4Q7Z404 712 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RBM15Q96T37 977 aaKnown RBP eCLIP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CHID1Q9BWS9 393 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PHGDHO43175 533 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SORBS3O60504 671 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TPBGLP0DKB5 382 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 POU1F1P28069 291 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ACTR3P61158 418 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SH3RF3Q8TEJ3 882 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ZNF512BQ96KM6 892 aaPredicted RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 AGBL1Q96MI9 1066 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 SNX18Q96RF0 628 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 BRD9Q9H8M2 597 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 MARCH7Q9H992 704 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ZNF180Q9UJW8 692 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ZNF232Q9UNY5 417 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ZBTB1Q9Y2K1 713 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RAD51CO43502 376 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 STAT5AP42229 794 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PHKA2P46019 1235 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CDK9P50750 372 aaKnown RBP7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 STAT5BP51692 787 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CDK16Q00536 496 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ZBED5Q49AG3 693 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ELMSAN1Q6PJG2 1045 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 TAMM41Q96BW9 452 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 CORO1BQ9BR76 489 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ACAD9Q9H845 621 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 LOC110117498-PIK3R3F6TDL0 507 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 DDHD2O94830 711 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ALDH1B1P30837 517 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 DYNLT1P63172 113 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 USP49Q70CQ1 688 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 RAPH1Q70E73 1250 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 ANGPTL6Q8NI99 470 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PIK3R3Q92569 461 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 PHTF1Q9UMS5 762 aa7.77□□□□□ -1.17
SYNPO2-202ENST00000429713 NUP205Q92621 2012 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 TRIM64A6NGJ6 449 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 TRIM64BA6NI03 449 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 SFI1A8K8P3 1242 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 YKT6O15498 198 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 MAGEA4P43358 317 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 EFTUD2Q15029 972 aaKnown RBP eCLIP7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 LRRC14Q15048 493 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 ALFQ53S48 1182 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 SCYL2Q6P3W7 929 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 C8orf59Q8N0T1 100 aaPredicted RBP7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 KIF2BQ8N4N8 673 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 DEPDC1BQ8WUY9 529 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 C1orf21Q9H246 121 aa7.76□□□□□ -1.17
SYNPO2-202ENST00000429713 STON1Q9Y6Q2 735 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms