RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 NPLOC4Q8TAT6 608 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TRIB2Q92519 343 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 HSPH1Q92598 858 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 KRT35Q92764 455 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ALPK1Q96QP1 1244 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 DCUN1D5Q9BTE7 237 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MYL10Q9BUA6 226 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 C1orf50Q9BV19 199 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 THG1LQ9NWX6 298 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 GDAP2Q9NXN4 497 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CNOT11Q9UKZ1 510 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TIAM2Q8IVF5 1701 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TAF1P21675 1872 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MIF4GDA9UHW6 222 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 H3BNH8 94 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 XPO1O14980 1071 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 HOXC11O43248 304 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PLEKHA8P1O95397 391 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ENO1P06733 434 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRKACAP17612 351 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PSMC3P17980 439 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 BMPR1AP36894 532 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PIK3CAP42336 1068 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ERFP50548 548 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARL4CP56559 192 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TXNL4AP83876 142 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PUM3Q15397 648 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CAVIN4Q5BKX8 364 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PPM1LQ5SGD2 360 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 C6orf10Q5SRN2 563 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF746Q6NUN9 644 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TMC5Q6UXY8 1006 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADAT2Q7Z6V5 191 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCDC28AQ8IWP9 274 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC15A4Q8N697 577 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MARCH10Q8NA82 808 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 SH3RF3Q8TEJ3 882 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 SGCDQ92629 289 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ATP2A3Q93084 1043 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TRIM63Q969Q1 353 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TXNDC15Q96J42 360 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 C7orf25Q9BPX7 421 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 LSM14BQ9BX40 385 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 TSSK1BQ9BXA7 367 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF341Q9BYN7 854 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 RPF2Q9H7B2 306 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 EPB41L4AQ9HCS5 686 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ABI2Q9NYB9 513 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 KCNK4Q9NYG8 393 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 PI4KBQ9UBF8 816 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 SUCOQ9UBS9 1254 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 VANGL2Q9ULK5 521 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 SORCS3Q9UPU3 1222 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 MYRFQ9Y2G1 1151 aa9.2□□□□□ -0.94
CDC42BPA-206ENST00000429440 ATAD5Q96QE3 1844 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 NCANO14594 1321 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 FLT1P17948 1338 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 SFI1A8K8P3 1242 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ANKRD63C9JTQ0 380 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 CYP26A1O43174 497 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 KLHL41O60662 606 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF254O75437 659 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 SEC24DO94855 1032 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARHGEF15O94989 841 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ATE1O95260 518 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 KRT5P13647 590 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 CRKLP46109 303 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 STX3Q13277 289 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 CTTNQ14247 550 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLFN13Q68D06 897 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 PLEKHA7Q6IQ23 1121 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ANKRD26P1Q6NSI1 321 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 SYDE1Q6ZW31 735 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 LYSMD3Q7Z3D4 306 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 DGLUCYQ7Z3D6 616 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 IGFN1Q86VF2 1251 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 RALGPS2Q86X27 583 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF354CQ86Y25 554 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 SAMD14Q8IZD0 417 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 PROM2Q8N271 834 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 PDPRQ8NCN5 879 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 AFG1LQ8WV93 481 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 KBTBD7Q8WVZ9 684 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 TP53INP1Q96A56 240 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZUFSPQ96AP4 578 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 HERC2P3Q9BVR0 1158 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 TRIM9Q9C026 710 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 OR2B2Q9GZK3 357 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.19□□□□□ -0.948e-7■■■■■ 37.5
CDC42BPA-206ENST00000429440 SMARCAD1Q9H4L7 1026 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 TMEM9Q9P0T7 183 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 PTBP2Q9UKA9 531 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 CORINQ9Y5Q5 1042 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARPC4-TTLL3A0A0A6YYG9 625 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 IQANK1A0A1B0GTG1 560 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms