RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 LURAP1LQ8IV03 231 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 MYCT1Q8N699 235 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 DNASE2BQ8WZ79 361 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 NXPE2Q96DL1 559 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 ARID3AQ99856 593 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 SYT15Q9BQS2 421 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 TTLL2Q9BWV7 592 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 IKZF4Q9H2S9 585 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 ZHX3Q9H4I2 956 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 TBC1D14Q9P2M4 693 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 MAGEC2Q9UBF1 373 aaPredicted RBP12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 EIF2B4Q9UI10 523 aaKnown RBP12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 PCDHB6Q9Y5E3 794 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 PTPN13Q12923 2485 aa12.38□□□□□ -0.43
ALMS1P1-201ENST00000428767 WASH3PC4AMC7 463 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 HOXC11O43248 304 aaPredicted RBP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 KRT19P08727 400 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 PLCG1P19174 1290 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 ANP32AP39687 249 aaKnown RBP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 TAF10Q12962 218 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 ANKRD1Q15327 319 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 PREPLQ4J6C6 727 aaPredicted RBP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 IL27RAQ6UWB1 636 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 DDX42Q86XP3 938 aaKnown RBP eCLIP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 CACUL1Q86Y37 369 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 TMEM25Q86YD3 366 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 KIAA1958Q8N8K9 716 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 SNX19Q92543 992 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 WBP2Q969T9 261 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 CDK5RAP3Q96JB5 506 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 FOXP1Q9H334 677 aaPredicted RBP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 CLMPQ9H6B4 373 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 CRTAC1Q9NQ79 661 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 SPHK2Q9NRA0 654 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 WSB2Q9NYS7 404 aaPredicted RBP12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 GMIPQ9P107 970 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 PCDHGB2Q9Y5G2 931 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 AK5Q9Y6K8 562 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 CKAP5Q14008 2032 aa12.37□□□□□ -0.43
ALMS1P1-201ENST00000428767 PIEZO2Q9H5I5 2752 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 E2F8A0AVK6 867 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 E9PAM4 449 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 F8VP50 259 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 RRP8O43159 456 aaKnown RBP12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 TNFSF14O43557 240 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 LMO2P25791 158 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 LHX1P48742 406 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 CSNK1EP49674 416 aaKnown RBP12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 CXADRP78310 365 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 IL9RQ01113 521 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 ST3GAL1Q11201 340 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 PTPRNQ16849 979 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 TAF1BQ53T94 588 aaPredicted RBP12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 FAM171BQ6P995 826 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 DBX2Q6ZNG2 339 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 GPR155Q7Z3F1 870 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 GPBP1Q86WP2 473 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 C1orf127Q8N9H9 656 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 GABRG3Q99928 467 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 TRIM9Q9C026 710 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 ODF2LQ9ULJ1 636 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 SLCO1B1Q9Y6L6 691 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 PLXNA2O75051 1894 aa12.36□□□□□ -0.43
ALMS1P1-201ENST00000428767 TEX51A0A1B0GUA7 166 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 PRRT4C9JH25 899 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 KCNK3O14649 394 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 GABRDO14764 452 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 COCHO43405 550 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 TRAK2O60296 914 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 IL18RAPO95256 599 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 PDGFRBP09619 1106 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 GRK6P43250 576 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 SUZ12Q15022 739 aaKnown RBP12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 KIF19Q2TAC6 998 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 C6orf118Q5T5N4 469 aa12.35□□□□□ -0.43
ALMS1P1-201ENST00000428767 LAYNQ6UX15 382 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms