RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CASP14P31944 242 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 KRT20P35900 424 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 EIF4A3P38919 411 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PPP3CCP48454 512 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CSE1LP55060 971 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 FAAP100Q0VG06 881 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 USP4Q13107 963 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CCINQ13939 588 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 SUZ12Q15022 739 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ACOX1Q15067 660 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TRIP13Q15645 432 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 HIST2H2ACQ16777 129 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 C6orf118Q5T5N4 469 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 NUGGCQ68CJ6 796 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 HIST2H2AA3Q6FI13 130 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 RRM2BQ7LG56 351 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MCOLN3Q8TDD5 553 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MTMR9Q96QG7 549 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 DZANK1Q9NVP4 752 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MARCH2Q9P0N8 246 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TNFSF13BQ9Y275 285 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 C2orf81A6NN90 581 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 H2AFYO75367 372 aaKnown RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 FTLP02792 175 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PYGLP06737 847 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 VDRP11473 427 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 HOXD8P13378 290 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 BDNFP23560 247 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 MAGEA9P43362 315 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TUSC3Q13454 348 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PDK1Q15118 436 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 LEXMQ3ZCV2 418 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SPDYE7PQ495Y7 208 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PRPF39Q86UA1 669 aaKnown RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 RHOT1Q8IXI2 618 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SLC25A41Q8N5S1 370 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 KREMEN2Q8NCW0 462 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ING5Q8WYH8 240 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SDCCAG3Q96C92 435 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SERPINB11Q96P15 392 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 NLNQ9BYT8 704 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ECT2Q9H8V3 914 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CHORDC1Q9UHD1 332 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 HGSO14964 777 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 FOXD2O60548 495 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SMPD1P17405 629 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ITGALP20701 1170 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 NRIP1P48552 1158 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ROR1Q01973 937 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SHHQ15465 462 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TMEM31Q5JXX7 168 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 DOK6Q6PKX4 331 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 FRMD5Q7Z6J6 570 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 KSR1Q8IVT5 923 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CMTR2Q8IYT2 770 aaKnown RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 KIAA0319LQ8IZA0 1049 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ZNF564Q8TBZ8 553 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 HAUS8Q9BT25 410 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 GPR88Q9GZN0 384 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SEMA4AQ9H3S1 761 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SPATA6Q9NWH7 488 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 BCAP29Q9UHQ4 241 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CDY1Q9Y6F8 540 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PLXNA1Q9UIW2 1896 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 LRRC72A6NJI9 287 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TTI1O43156 1089 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SNAI1O95863 264 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 MT-ND3P03897 115 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TAL1P17542 331 aaPredicted RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CHRM3P20309 590 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 GTF2H1P32780 548 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 WASP42768 502 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CAPZA2P47755 286 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 RCN2Q14257 317 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TCEA2Q15560 299 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 TARBP2Q15633 366 aaKnown RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 FAM26DQ5JW98 314 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SH2D4BQ5SQS7 431 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PKN3Q6P5Z2 889 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 MTHFD1LQ6UB35 978 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CENPUQ71F23 418 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 VSIG1Q86XK7 387 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 RNF135Q8IUD6 432 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 GPR65Q8IYL9 337 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CAMKK1Q8N5S9 505 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 MAB21L3Q8N8X9 362 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 IPMKQ8NFU5 416 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SLC26A7Q8TE54 656 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ARL8AQ96BM9 186 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.51□□□□□ -1.212e-7■■■□□ 14.8
CNOT4-206ENST00000428680 CYP3A43Q9HB55 503 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 PALMO75781 387 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 RPL9P32969 192 aaKnown RBP7.51□□□□□ -1.21
CNOT4-206ENST00000428680 SCNN1BP51168 640 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 CDH8P55286 799 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 LRRC32Q14392 662 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 ARID5BQ14865 1188 aa7.51□□□□□ -1.21
CNOT4-206ENST00000428680 HLA-DQA1Q5Y7H0 255 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms