RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 DMWDQ09019 674 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 DHCR24Q15392 516 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 LONP2Q86WA8 852 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 DCLK2Q8N568 766 aa19.44■□□□□ 0.7
GPC1-205ENST00000427506 FANCMQ8IYD8 2048 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 ADH1CP00326 375 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 ATP5C1P36542 298 aaKnown RBP19.43■□□□□ 0.7
GPC1-205ENST00000427506 PGFP49763 221 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 CETN1Q12798 172 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 PAK1Q13153 545 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 CAMK4Q16566 473 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 PRR23BQ6ZRT6 265 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 KIAA2013Q8IYS2 634 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 RPLP0P6Q8NHW5 317 aa19.43■□□□□ 0.7
GPC1-205ENST00000427506 ZFRQ96KR1 1074 aaKnown RBP19.43■□□□□ 0.7
GPC1-205ENST00000427506 A0A1W2PQH9 124 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 TBX18O95935 607 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 RARGP13631 454 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 CD19P15391 556 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 TBXAS1P24557 533 aaPredicted RBP19.42■□□□□ 0.7
GPC1-205ENST00000427506 OPRD1P41143 372 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 KIF11P52732 1056 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 GOLGA8FQ08AF8 430 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 GOLGA8DPQ0D2H9 430 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 LPAL2Q16609 132 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 ARHGAP17Q68EM7 881 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 RHBDF2Q6PJF5 856 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 CCDC26Q8TAB7 109 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 OTUB2Q96DC9 234 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 NMUR1Q9HB89 426 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 NAGPAQ9UK23 515 aa19.42■□□□□ 0.7
GPC1-205ENST00000427506 MYH10P35580 1976 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 GNA14O95837 355 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 ADH5P11766 374 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 HOXA6P31267 233 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 CNR2P34972 360 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 ANP32AP39687 249 aaKnown RBP19.41■□□□□ 0.7
GPC1-205ENST00000427506 PXNP49023 591 aaPredicted RBP19.41■□□□□ 0.7
GPC1-205ENST00000427506 PSEN1P49768 467 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 SEC13P55735 322 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 SIM2Q14190 667 aaPredicted RBP19.41■□□□□ 0.7
GPC1-205ENST00000427506 SGO2Q562F6 1265 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 C10orf120Q5SQS8 335 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 LY6G5CQ5SRR4 150 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 FOXR2Q6PJQ5 311 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 TADA2BQ86TJ2 420 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 TRIML1Q8N9V2 468 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 ANKRD52Q8NB46 1076 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 EZH1Q92800 747 aaPredicted RBP19.41■□□□□ 0.7
GPC1-205ENST00000427506 ACDQ96AP0 544 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 NT5C1BQ96P26 610 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 SRRTQ9BXP5 876 aaKnown RBP19.41■□□□□ 0.7
GPC1-205ENST00000427506 CYLDQ9NQC7 956 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 OSER1Q9NX31 292 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 KIAA1468Q9P260 1216 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 HESX1Q9UBX0 185 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 GMEB2Q9UKD1 530 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 NUDT5Q9UKK9 219 aa19.41■□□□□ 0.7
GPC1-205ENST00000427506 HRO43593 1189 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 FGFR1OPO95684 399 aaKnown RBP19.4■□□□□ 0.7
GPC1-205ENST00000427506 RALAP11233 206 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 HOXC13P31276 330 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 SLC6A11P48066 632 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 GAD2Q05329 585 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 SRSF5Q13243 272 aaKnown RBP19.4■□□□□ 0.7
GPC1-205ENST00000427506 GOLGA7BQ2TAP0 167 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 GAB4Q2WGN9 574 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 BTBD8Q5XKL5 378 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 CEP68Q76N32 757 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 CCDC186Q7Z3E2 898 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 WDR5BQ86VZ2 330 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 BBS7Q8IWZ6 715 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 PPM1KQ8N3J5 372 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 WBP2Q969T9 261 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 PNKPQ96T60 521 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 KLF16Q9BXK1 252 aaPredicted RBP19.4■□□□□ 0.7
GPC1-205ENST00000427506 UBXN6Q9BZV1 441 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.4■□□□□ 0.7
GPC1-205ENST00000427506 DNMT3LQ9UJW3 386 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 LSM7Q9UK45 103 aaKnown RBP19.4■□□□□ 0.7
GPC1-205ENST00000427506 TSPAN16Q9UKR8 245 aa19.4■□□□□ 0.7
GPC1-205ENST00000427506 DMDP11532 3685 aa19.39■□□□□ 0.7
GPC1-205ENST00000427506 PMM2O15305 246 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 P4HA2O15460 535 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 APODP05090 189 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 ANO4Q32M45 955 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 C2orf27AQ580R0 203 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 PIGZQ86VD9 579 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 CAMKK1Q8N5S9 505 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 HHIPQ96QV1 700 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 CDK5RAP1Q96SZ6 601 aaKnown RBP19.39■□□□□ 0.69
GPC1-205ENST00000427506 POLR3BQ9NW08 1133 aaPredicted RBP19.39■□□□□ 0.69
GPC1-205ENST00000427506 PCDHB4Q9Y5E5 795 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.39■□□□□ 0.69
GPC1-205ENST00000427506 USP3Q9Y6I4 520 aa19.39■□□□□ 0.69
GPC1-205ENST00000427506 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.38■□□□□ 0.69
GPC1-205ENST00000427506 K7EQS6 105 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 MDM4O15151 490 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 CCDC192P0DO97 292 aa19.38■□□□□ 0.69
GPC1-205ENST00000427506 VDRP11473 427 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms