RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.47
FIRRE-201ENST00000427391 MGRN1O60291 552 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 IGFBP6P24592 240 aaPredicted RBP12.11□□□□□ -0.47
FIRRE-201ENST00000427391 EPHX2P34913 555 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
FIRRE-201ENST00000427391 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 TCP10LQ8TDR4 215 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 KLHL29Q96CT2 875 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 VRTNQ9H8Y1 702 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 ITGA11Q9UKX5 1188 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 NUMBLQ9Y6R0 609 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 TCRBV9S1A1TA0A576 114 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 ENDOD1O94919 500 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 ATP6V1G2O95670 118 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 GSTA1P08263 222 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 LMO2P25791 158 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 PCK1P35558 622 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 MSH2P43246 934 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 GSCP56915 257 aaPredicted RBP12.11□□□□□ -0.47
FIRRE-201ENST00000427391 RNASELQ05823 741 aaKnown RBP12.11□□□□□ -0.47
FIRRE-201ENST00000427391 CEP128Q6ZU80 1094 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 PCGF5Q86SE9 256 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 IFNLR1Q8IU57 520 aaPredicted RBP12.11□□□□□ -0.47
FIRRE-201ENST00000427391 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 MZB1Q8WU39 189 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 PTPRN2Q92932 1015 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 ERP27Q96DN0 273 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 SERAC1Q96JX3 654 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 PCDH18Q9HCL0 1135 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 SLC24A2Q9UI40 661 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 CHKBQ9Y259 395 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 L3MBTL1Q9Y468 752 aa12.11□□□□□ -0.47
FIRRE-201ENST00000427391 E7ESA3 106 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 UGT1A9O60656 530 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 LCP1P13796 627 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 NQO1P15559 274 aaKnown RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 RABGGTBP53611 331 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 HDAC4P56524 1084 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 FAAP100Q0VG06 881 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 HIC1Q14526 733 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PDK4Q16654 411 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 OTOAQ7RTW8 1153 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 CATSPER4Q7RTX7 472 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 DPP9Q86TI2 863 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 UGT1A7Q9HAW7 530 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 UGT1A10Q9HAW8 530 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 UGT1A8Q9HAW9 530 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 NOD2Q9HC29 1040 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 TMPRSS4Q9NRS4 437 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 CACNG4Q9UBN1 327 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 DCTN4Q9UJW0 460 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 C2CD2Q9Y426 696 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 CXorf49A8MYA2 514 aaPredicted RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 APRTP07741 180 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 BCAR1P56945 870 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 GBE1Q04446 702 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 KCNJ11Q14654 390 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PLEKHG4Q58EX7 1191 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PYROXD2Q8N2H3 581 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 NPHS2Q9NP85 383 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PLXNA1Q9UIW2 1896 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 CHUKO15111 745 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 SPTLC1O15269 473 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 MMP3P08254 477 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 SDC4P31431 198 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PHBP35232 272 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 GRIA1P42261 906 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 ZNF200P98182 395 aaPredicted RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 SLC10A2Q12908 348 aaPredicted RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 NR1H3Q13133 447 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 SOWAHAQ2M3V2 549 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 CTAGE3PQ8IX95 158 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
FIRRE-201ENST00000427391 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
FIRRE-201ENST00000427391 DOCK3Q8IZD9 2030 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 A8MXQ7 604 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 RECQL4O94761 1208 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 GRM5P41594 1212 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 POU5F1BQ06416 359 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 PTK7Q13308 1070 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 SLC35F5Q8WV83 523 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 TMEM40Q8WWA1 233 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
FIRRE-201ENST00000427391 PLAC1Q9HBJ0 212 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 VTA1Q9NP79 307 aa12.09□□□□□ -0.47
FIRRE-201ENST00000427391 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms