RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 EIF2B2P49770 351 aaKnown RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 PSMD4P55036 377 aaKnown RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 NFYCQ13952 458 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 EPHX4Q8IUS5 362 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 OR6J1Q8NGC5 347 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 NEDD1Q8NHV4 660 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 TEX13BQ9BXU2 312 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 GSTK1Q9Y2Q3 226 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 SMIM22K7EJ46 135 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 ZBTB39O15060 712 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 RPN2P04844 631 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 RARGP13631 454 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 KIF2BQ8N4N8 673 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 MYRFQ9Y2G1 1151 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 SNX9Q9Y5X1 595 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 PSMD12O00232 456 aaPredicted RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 TMEM94Q12767 1356 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 EFCAB10A6NFE3 127 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 MYL12BO14950 172 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 CST8O60676 142 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 CCDC130P13994 396 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 TRAF2Q12933 501 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 SGO1Q5FBB7 561 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 SLC25A24Q6NUK1 477 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 CCDC33Q8N5R6 958 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 IPPQ9Y573 584 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 EIF4E1BA6NMX2 242 aaKnown RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 BTKQ06187 659 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 SHC4Q6S5L8 630 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 MAGEB10Q96LZ2 347 aaPredicted RBP14.88□□□□□ -0.03
PTPN13-203ENST00000427191 PRDM16Q9HAZ2 1276 aa14.88□□□□□ -0.03
PTPN13-203ENST00000427191 F5H6K3 240 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 MSH3P20585 1137 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 NOS3P29474 1203 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 SERPINB5P36952 375 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 KLRC3Q07444 240 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 MROH9Q5TGP6 573 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 MACC1Q6ZN28 852 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 AP3S1Q92572 193 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 S100A13Q99584 98 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 HEY2Q9UBP5 337 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 A0A087WXM4 84 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 RGS20O76081 388 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 KLHL18O94889 574 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 HSMCR30P0CW71 290 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 OXCT1P55809 520 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 CDC16Q13042 620 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 PROSER3Q2NL68 480 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 FBXO42Q6P3S6 717 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 INTS13Q9NVM9 706 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ERVK-7P63135 1459 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
PTPN13-203ENST00000427191 HPCAL1P37235 193 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 FEN1P39748 380 aaKnown RBP14.87□□□□□ -0.03
PTPN13-203ENST00000427191 TRAF3Q13114 568 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 GALNTL6Q49A17 601 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 LIN54Q6MZP7 749 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 CACTIN-AS1Q8N1I8 211 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 MIEF2Q96C03 454 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 DAPK2Q9UIK4 370 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 RCVRNP35243 200 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 TCEAL5Q5H9L2 206 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 METTL16Q86W50 562 aaKnown RBP14.87□□□□□ -0.03
PTPN13-203ENST00000427191 WDR60Q8WVS4 1066 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 SPIRE2Q8WWL2 714 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ZSWIM1Q9BR11 485 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 AFF2P51816 1311 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ATP12AP54707 1039 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 RSL24D1Q9UHA3 163 aaKnown RBP14.87□□□□□ -0.03
PTPN13-203ENST00000427191 OVOS2A0A0G2JMS6 1433 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 OVOS2A0A0J9YW53 1432 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 OVOS2Q6IE36 1432 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF185O15231 689 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 SASH1O94885 1247 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ERVK-10P10266 1014 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ITGALP20701 1170 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 EMC2Q15006 297 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 RASA2Q15283 850 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 SPDYCQ5MJ68 293 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 FAM182BQ5T319 152 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 TPCN2Q8NHX9 752 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 SCUBE2Q9NQ36 999 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 CRNNQ9UBG3 495 aaPredicted RBP14.87□□□□□ -0.03
PTPN13-203ENST00000427191 TSC22D2O75157 780 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 DGKIO75912 1065 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 RNASE11Q8TAA1 199 aaKnown RBP14.87□□□□□ -0.03
PTPN13-203ENST00000427191 MYCBPAPQ8TBZ2 947 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 ACTRT1Q8TDG2 376 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 CORO2BQ9UQ03 480 aa14.87□□□□□ -0.03
PTPN13-203ENST00000427191 PREX2Q70Z35 1606 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 RENBPP51606 427 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 TDRD5Q8NAT2 981 aaKnown RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 TBC1D13Q9NVG8 400 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 GNG14A0A1W2PPG7 69 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 SUPT7LO94864 414 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 GH1P01241 217 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms