RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 B3GNT5Q9BYG0 378 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 CEP41Q9BYV8 373 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 PPP1R12CQ9BZL4 782 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 TMEM134Q9H6X4 195 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 TEX264Q9Y6I9 313 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 BPTFQ12830 3046 aa14.97□□□□□ -0.01
ERCC3-202ENST00000426778 IQANK1A0A1B0GTG1 560 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 LACTBL1A8MY62 500 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 HCRTO43612 131 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 TBX10O75333 385 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 WFS1O76024 890 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 CYP3A5P20815 502 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 SLC18A1P54219 525 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 ALDH18A1P54886 795 aaKnown RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 YWHAZP63104 245 aaKnown RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 CDK16Q00536 496 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 BST1Q10588 318 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 KRT81Q14533 505 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 PRKD1Q15139 912 aaPredicted RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 RASA2Q15283 850 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 ZPBP2Q6X784 338 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 SLC44A1Q8WWI5 657 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 ZNF518BQ9C0D4 1074 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 VPS11Q9H270 941 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 FAM49BQ9NUQ9 324 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 ZC3H7BQ9UGR2 993 aaKnown RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 TM9SF1O15321 606 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 CCDC22O60826 627 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 CSH1P0DML2 217 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 CSH2P0DML3 217 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 PTPN7P35236 360 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 PSEN1P49768 467 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 NEK3P51956 506 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 CHI3L2Q15782 390 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 SNX30Q5VWJ9 437 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 BSPRYQ5W0U4 402 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 C16orf46Q6P387 395 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 FAM183BPQ6ZVS7 135 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 ZBTB8OSQ8IWT0 167 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 PDCD7Q8N8D1 485 aaKnown RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 OXNAD1Q96HP4 312 aaPredicted RBP14.96□□□□□ -0.01
ERCC3-202ENST00000426778 MIS12Q9H081 205 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 PLAC1Q9HBJ0 212 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 AS3MTQ9HBK9 375 aa14.96□□□□□ -0.01
ERCC3-202ENST00000426778 B2RBV5 119 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 NOP56O00567 594 aaKnown RBP14.96□□□□□ -0.02
ERCC3-202ENST00000426778 CDH5P33151 784 aaPredicted RBP14.96□□□□□ -0.02
ERCC3-202ENST00000426778 MRPS5P82675 430 aaKnown RBP14.96□□□□□ -0.02
ERCC3-202ENST00000426778 TAP1Q03518 808 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 AMHR2Q16671 573 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 CYP4V2Q6ZWL3 525 aaPredicted RBP14.96□□□□□ -0.02
ERCC3-202ENST00000426778 SCUBE3Q8IX30 993 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 TTC13Q8NBP0 860 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 SKA1Q96BD8 255 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 EBF4Q9BQW3 602 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 CDT1Q9H211 546 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 ZFATQ9P243 1243 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 MFHAS1Q9Y4C4 1052 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 LRRC42Q9Y546 428 aa14.96□□□□□ -0.02
ERCC3-202ENST00000426778 MCM3APO60318 1980 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 ZBTB42B2RXF5 422 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 ENPEPQ07075 957 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 UBAP2LQ14157 1087 aaKnown RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 KCNJ11Q14654 390 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 MPZL3Q6UWV2 235 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 CMASQ8NFW8 434 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 SCG3Q8WXD2 468 aaKnown RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 RPF1Q9H9Y2 349 aaKnown RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 PIDD1Q9HB75 910 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 BATF3Q9NR55 127 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 ADAMTS5Q9UNA0 930 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 TTLL3Q9Y4R7 772 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 NVLO15381 856 aaKnown RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 LYPLA1O75608 230 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 RFC5P40937 340 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 CCDC62Q6P9F0 684 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 TMEM154Q6P9G4 183 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 SH2D5Q6ZV89 423 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 FBXO16Q8IX29 292 aaPredicted RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 TRPM4Q8TD43 1214 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 SEPT1Q8WYJ6 367 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 DDX50Q9BQ39 737 aaKnown RBP14.95□□□□□ -0.02
ERCC3-202ENST00000426778 ARHGEF4Q9NR80 690 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 DLGAP2Q9P1A6 1054 aa14.95□□□□□ -0.02
ERCC3-202ENST00000426778 IGKV6D-21A0A0A0MT36 114 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 CCDC189A1A4V9 331 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 PRPSAP2O60256 369 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 USP1O94782 785 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 PGM1P36871 562 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 GPD2P43304 727 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 NDST1P52848 882 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 AQP5P55064 265 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 NOMO1Q15155 1222 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 WASHC2DQ5SRD0 308 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 THEMIS2Q5TEJ8 643 aa14.94□□□□□ -0.02
ERCC3-202ENST00000426778 CAND1Q86VP6 1230 aaKnown RBP14.94□□□□□ -0.02
ERCC3-202ENST00000426778 RILPQ96NA2 401 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms