RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TUBP50607 506 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 NDST1P52848 882 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 AP3M2P53677 418 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 MRPS21P82921 87 aaKnown RBP10.65□□□□□ -0.7
GACAT3-201ENST00000426539 CREB5Q02930 508 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 ELF2Q15723 593 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 LY6G5CQ5SRR4 150 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 HECTD3Q5T447 861 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 N4BP2L1Q5TBK1 243 aaPredicted RBP10.65□□□□□ -0.7
GACAT3-201ENST00000426539 PMS2CLQ68D20 193 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 IL31Q6EBC2 164 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 ANO7Q6IWH7 933 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 SV2AQ7L0J3 742 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 DDX42Q86XP3 938 aaKnown RBP eCLIP10.65□□□□□ -0.7
GACAT3-201ENST00000426539 HSCBQ8IWL3 235 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 BBS7Q8IWZ6 715 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 ETFBKMTQ8IXQ9 262 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 CRYBG2Q8N1P7 616 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 ALLCQ8N6M5 410 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 TXNDC5Q8NBS9 432 aaKnown RBP10.65□□□□□ -0.7
GACAT3-201ENST00000426539 PDZD8Q8NEN9 1154 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 OLIG1Q8TAK6 271 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 SMARCD1Q96GM5 515 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 TWNKQ96RR1 684 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 PNKPQ96T60 521 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 MED10Q9BTT4 135 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 CSNK1G1Q9HCP0 422 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 DMAP1Q9NPF5 467 aaPredicted RBP10.65□□□□□ -0.7
GACAT3-201ENST00000426539 ZDHHC4Q9NPG8 344 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 KRT82Q9NSB4 513 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 EXOC1Q9NV70 894 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 HCN2Q9UL51 889 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 HPSEQ9Y251 543 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 MYO16Q9Y6X6 1858 aa10.65□□□□□ -0.7
GACAT3-201ENST00000426539 HELZP42694 1942 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 A0A1B0GVL5 298 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 PDXKO00764 312 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 TRIM24O15164 1050 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 KRT37O76014 449 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 KLF8O95600 359 aaPredicted RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 CAVIN2O95810 425 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 ADH1CP00326 375 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 ASS1P00966 412 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 APODP05090 189 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 CMA1P23946 247 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 PMLP29590 882 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 GBP1P32455 592 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 KDSRQ06136 332 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 SGSM1Q2NKQ1 1148 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 USP39Q53GS9 565 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 GPRIN1Q7Z2K8 1008 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 TMEM25Q86YD3 366 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 FRMD1Q8N878 549 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 C12orf29Q8N999 325 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 CCDC26Q8TAB7 109 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 SLC2A14Q8TDB8 520 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 RLN3Q8WXF3 142 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 DDX1Q92499 740 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 TNIP3Q96KP6 325 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 DUSP9Q99956 384 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 LSM14BQ9BX40 385 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 APOBEC3GQ9HC16 384 aaKnown RBP10.64□□□□□ -0.71
GACAT3-201ENST00000426539 ARHGEF4Q9NR80 690 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 FAM49BQ9NUQ9 324 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 COMMD8Q9NX08 183 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 OSER1Q9NX31 292 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 TBC1D14Q9P2M4 693 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 CFAP45Q9UL16 551 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 ZDHHC9Q9Y397 364 aa10.64□□□□□ -0.71
GACAT3-201ENST00000426539 TPRP12270 2363 aaKnown RBP10.63□□□□□ -0.71
GACAT3-201ENST00000426539 ATP8B3O60423 1300 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 LNP1A1A4G5 178 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 PATE3B3GLJ2 98 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 HHLA1C9JL84 531 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 IKBKBO14920 756 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
GACAT3-201ENST00000426539 TULP3O75386 442 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 TBX18O95935 607 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 HLA-DRAP01903 254 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 RPN1P04843 607 aaKnown RBP10.63□□□□□ -0.71
GACAT3-201ENST00000426539 P2RY2P41231 377 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 GRIA2P42262 883 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 TNFRSF4P43489 277 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 MAP3K7CLP57077 242 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 GAD2Q05329 585 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 CEP135Q66GS9 1140 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 RNF43Q68DV7 783 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 UNC93AQ86WB7 457 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 MIB1Q86YT6 1006 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 NAT16Q8N8M0 369 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 OTUB2Q96DC9 234 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 EDEM2Q9BV94 578 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 KLF16Q9BXK1 252 aaPredicted RBP10.63□□□□□ -0.71
GACAT3-201ENST00000426539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
GACAT3-201ENST00000426539 SPHK2Q9NRA0 654 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 MBD1Q9UIS9 605 aaPredicted RBP10.63□□□□□ -0.71
GACAT3-201ENST00000426539 TRAF3IP3Q9Y228 551 aa10.63□□□□□ -0.71
GACAT3-201ENST00000426539 SH3BP1Q9Y3L3 701 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms