RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 GAREM2Q75VX8 874 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 CCDC112Q8NEF3 446 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 SLC30A5Q8TAD4 765 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 ATXN2LQ8WWM7 1075 aaKnown RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 PCDHB18PQ96TA0 734 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 NHEJ1Q9H9Q4 299 aaPredicted RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 LUC7LQ9NQ29 371 aaKnown RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 OLA1Q9NTK5 396 aaKnown RBP25.3■■□□□ 1.64
APOE-202ENST00000425718 TMEM51Q9NW97 253 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 ADAM22Q9P0K1 906 aa25.3■■□□□ 1.64
APOE-202ENST00000425718 A0A1W2PRU2 124 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 ZNF840PA6NDX5 716 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 DDX3XO00571 662 aaKnown RBP eCLIP25.29■■□□□ 1.642e-46■■■■■ 74.2
APOE-202ENST00000425718 IPO7O95373 1038 aaKnown RBP25.29■■□□□ 1.64
APOE-202ENST00000425718 MYBL1P10243 752 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 C10orf76Q5T2E6 689 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 OR6B2Q6IFH4 312 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 BEND5Q7L4P6 421 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 SHKBP1Q8TBC3 707 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 PHF7Q9BWX1 381 aaPredicted RBP25.29■■□□□ 1.64
APOE-202ENST00000425718 TASP1Q9H6P5 420 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 ABCC13Q9NSE7 274 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 GMIPQ9P107 970 aa25.29■■□□□ 1.64
APOE-202ENST00000425718 HELZP42694 1942 aaKnown RBP25.28■■□□□ 1.64
APOE-202ENST00000425718 GRXCR2A6NFK2 248 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 WEE1P30291 646 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 YWHAGP61981 247 aaKnown RBP eCLIP25.28■■□□□ 1.64
APOE-202ENST00000425718 NTHL1P78549 312 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 GOLGA8FQ08AF8 430 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 GOLGA8DPQ0D2H9 430 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 HECTD3Q5T447 861 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 BTBD8Q5XKL5 378 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 ALKBH5Q6P6C2 394 aaKnown RBP25.28■■□□□ 1.64
APOE-202ENST00000425718 GET4Q7L5D6 327 aaPredicted RBP25.28■■□□□ 1.64
APOE-202ENST00000425718 PLCD3Q8N3E9 789 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.28■■□□□ 1.64
APOE-202ENST00000425718 BAG1Q99933 345 aaPredicted RBP25.28■■□□□ 1.64
APOE-202ENST00000425718 POMKQ9H5K3 350 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 SLITRK6Q9H5Y7 841 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 NAGPAQ9UK23 515 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 CDH7Q9ULB5 785 aa25.28■■□□□ 1.64
APOE-202ENST00000425718 TRAV19A0A0A6YYK7 116 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 PAPSS1O43252 624 aaPredicted RBP25.27■■□□□ 1.64
APOE-202ENST00000425718 HSF2BPO75031 334 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 ABL1P00519 1130 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 LTFP02788 710 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 PLEKP08567 350 aaPredicted RBP25.27■■□□□ 1.64
APOE-202ENST00000425718 SLC6A3Q01959 620 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 SLC5A9Q2M3M2 681 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 KLHDC10Q6PID8 442 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 SCUBE3Q8IX30 993 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 FAM149B1Q96BN6 582 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 ISCUQ9H1K1 167 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 PRKAG3Q9UGI9 489 aa25.27■■□□□ 1.64
APOE-202ENST00000425718 FTLP02792 175 aaPredicted RBP25.26■■□□□ 1.63
APOE-202ENST00000425718 ERBB2P04626 1255 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 TEAD2Q15562 447 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 CCDC122Q5T0U0 273 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 GPR158Q5T848 1215 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 MMS22LQ6ZRQ5 1243 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 MON1BQ7L1V2 547 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 SLC26A9Q7LBE3 791 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 ARCQ7LC44 396 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 TMEM150AQ86TG1 271 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 XYLT1Q86Y38 959 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 MCOLN2Q8IZK6 566 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 RNF139Q8WU17 664 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 E2F7Q96AV8 911 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 CHP1Q99653 195 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 C11orf70Q9BRQ4 267 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 POPDC2Q9HBU9 364 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 RRN3Q9NYV6 651 aa25.26■■□□□ 1.63
APOE-202ENST00000425718 CHORDC1Q9UHD1 332 aaPredicted RBP25.26■■□□□ 1.63
APOE-202ENST00000425718 A0A087X0T9 212 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 A0A1W2PQH9 124 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 TADA3O75528 432 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 FAM228BP0C875 321 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 DESP17661 470 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 GBP2P32456 591 aaPredicted RBP25.25■■□□□ 1.63
APOE-202ENST00000425718 AVPR1AP37288 418 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 CCR2P41597 374 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 SPA17Q15506 151 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 ASTE1Q2TB18 679 aaPredicted RBP25.25■■□□□ 1.63
APOE-202ENST00000425718 BSPRYQ5W0U4 402 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 FAM183BPQ6ZVS7 135 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 TXLNBQ8N3L3 684 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 TDRD5Q8NAT2 981 aaKnown RBP25.25■■□□□ 1.63
APOE-202ENST00000425718 ITFG1Q8TB96 612 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 FGF13Q92913 245 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 TCEAL4Q96EI5 215 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 NACA2Q9H009 215 aa25.25■■□□□ 1.63
APOE-202ENST00000425718 ANKRD62A6NC57 917 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 PIK3R2O00459 728 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 CAPN9O14815 690 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 TLR5O60602 858 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 MOSPD3O75425 235 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 RARGP13631 454 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 CEBPBP17676 345 aa25.24■■□□□ 1.63
APOE-202ENST00000425718 YWHAZP63104 245 aaKnown RBP25.24■■□□□ 1.63
APOE-202ENST00000425718 CYP4F8P98187 520 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms