RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 PARD6AQ9NPB6 346 aa5.47□□□□□ -1.53
LINC00400-201ENST00000425609 G6PC2Q9NQR9 355 aa5.47□□□□□ -1.53
LINC00400-201ENST00000425609 IFT80Q9P2H3 777 aaPredicted RBP5.47□□□□□ -1.53
LINC00400-201ENST00000425609 C19orf53Q9UNZ5 99 aaPredicted RBP5.47□□□□□ -1.53
LINC00400-201ENST00000425609 SLC27A6Q9Y2P4 619 aa5.47□□□□□ -1.53
LINC00400-201ENST00000425609 FER1L4A9Z1Z3 1794 aa5.47□□□□□ -1.53
LINC00400-201ENST00000425609 MROH2BQ7Z745 1585 aa5.46□□□□□ -1.53
LINC00400-201ENST00000425609 PPM1DO15297 605 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 EPB41L2O43491 1005 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 RPP40O75818 363 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 PPP3CBP16298 524 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 NR4A1P22736 598 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 AKT1P31749 480 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ZEB1P37275 1124 aaPredicted RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 HNRNPMP52272 730 aaKnown RBP eCLIP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 GEMIN4P57678 1058 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ACTR2P61160 394 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ADAM17P78536 824 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 MTAPQ13126 283 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 RESTQ13127 1097 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ACOX1Q15067 660 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 LY6KQ17RY6 165 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ANKRD45Q5TZF3 282 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 RETSATQ6NUM9 610 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ARMC6Q6NXE6 501 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 MSANTD2Q6P1R3 559 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 RRAGAQ7L523 313 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 IZUMO1Q8IYV9 350 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ESX1Q8N693 406 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 METTL25Q8N6Q8 603 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 CPEB3Q8NE35 698 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 CSGALNACT1Q8TDX6 532 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 AFG1LQ8WV93 481 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 SKA1Q96BD8 255 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 ACTRT3Q9BYD9 372 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 SEPSECSQ9HD40 501 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 RASSF1Q9NS23 344 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 TERF2IPQ9NYB0 399 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 MAP3K20Q9NYL2 800 aaKnown RBP5.46□□□□□ -1.54
LINC00400-201ENST00000425609 USP22Q9UPT9 525 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 CNTN6Q9UQ52 1028 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 NOX1Q9Y5S8 564 aa5.46□□□□□ -1.54
LINC00400-201ENST00000425609 TRGV11A0A075B6L2 103 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 GXYLT2A0PJZ3 443 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 HMGB1P1B2RPK0 211 aaPredicted RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 HOXC11O43248 304 aaPredicted RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 SNX2O60749 519 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 PPP6R2O75170 966 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 CDKL5O76039 1030 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 VNN1O95497 513 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 PDHA1P08559 390 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 TNFAIP3P21580 790 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 BMPR1AP36894 532 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 CDK7P50613 346 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 CCR5P51681 352 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 TLE2Q04725 743 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 SMAD1Q15797 465 aaKnown RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 SPDYE7PQ495Y7 208 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 CLEC9AQ6UXN8 241 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 ANKS1BQ7Z6G8 1248 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 PCGF5Q86SE9 256 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 WDR60Q8WVS4 1066 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 MAELQ96JY0 434 aaKnown RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 SEC62Q99442 399 aaKnown RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 PAAF1Q9BRP4 392 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 TPSD1Q9BZJ3 242 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 ELAC1Q9H777 363 aaKnown RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 TMEM160Q9NX00 188 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 DRG1Q9Y295 367 aaKnown RBP5.45□□□□□ -1.54
LINC00400-201ENST00000425609 TMEM98Q9Y2Y6 226 aa5.45□□□□□ -1.54
LINC00400-201ENST00000425609 FAM20BO75063 409 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 WDR47O94967 919 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 CER1O95813 267 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 FAM163BP0C2L3 166 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 DDX6P26196 483 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00400-201ENST00000425609 LIFRP42702 1097 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 AARSP49588 968 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00400-201ENST00000425609 SELENOPP49908 381 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 MPP1Q00013 466 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 SLC25A3Q00325 362 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 G3BP1Q13283 466 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC00400-201ENST00000425609 CSHL1Q14406 222 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 R3HDM1Q15032 1099 aaKnown RBP5.44□□□□□ -1.54
LINC00400-201ENST00000425609 PIK3AP1Q6ZUJ8 805 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 MAVSQ7Z434 540 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 TRABD2AQ86V40 505 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 FSTL5Q8N475 847 aaPredicted RBP5.44□□□□□ -1.54
LINC00400-201ENST00000425609 C11orf44Q8N8P7 122 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 SUPT20HQ8NEM7 779 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 SOCS4Q8WXH5 440 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 LPIN2Q92539 896 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 C3orf49Q96BT1 292 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 MCRS1Q96EZ8 462 aa5.44□□□□□ -1.54
LINC00400-201ENST00000425609 TWNKQ96RR1 684 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms