RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 STILQ15468 1287 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CDKAL1Q5VV42 579 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 LCLAT1Q6UWP7 414 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 RALGPS2Q86X27 583 aaPredicted RBP23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 DDX42Q86XP3 938 aaKnown RBP eCLIP23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ZSWIM1Q9BR11 485 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 NMUR1Q9HB89 426 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SIX2Q9NPC8 291 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 OSER1Q9NX31 292 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 DLGAP2Q9P1A6 1054 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CFAP97Q9P2B7 532 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 NAGPAQ9UK23 515 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CNTN6Q9UQ52 1028 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 USP3Q9Y6I4 520 aa23.51■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SCAMP3O14828 347 aaKnown RBP23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 USP8P40818 1118 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 PLA2G4AP47712 749 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 TKTL1P51854 596 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 PTPN5P54829 565 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 MYL5Q02045 173 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 TCF15Q12870 199 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 RAB41Q5JT25 222 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 C1orf228Q6PIY5 440 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 TXNDC11Q6PKC3 985 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CPA6Q8N4T0 437 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ATP2A3Q93084 1043 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ZFRQ96KR1 1074 aaKnown RBP23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 NELL2Q99435 816 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 LRRC4Q9HBW1 653 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 FANCLQ9NW38 375 aa23.5■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CACNA1IQ9P0X4 2223 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 OTOL1A6NHN0 477 aaPredicted RBP23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 NCAM2O15394 837 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 PSEN1P49768 467 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ADIGQ0VDE8 80 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CNGA2Q16280 664 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 EML3Q32P44 896 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 PKDCCQ504Y2 493 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SCD5Q86SK9 330 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SECISBP2LQ93073 1101 aaKnown RBP23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ULBP1Q9BZM6 244 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CYLDQ9NQC7 956 aa23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 AJAP1Q9UKB5 411 aaPredicted RBP23.49■■□□□ 1.35
PTCHD3P2-201ENST00000424937 TBX18O95935 607 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 IRF1P10914 325 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 RARGP13631 454 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 KRT31Q15323 416 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SIX6OS1Q8N1H7 587 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 VPS16Q9H269 839 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 LINC00597Q9H2U6 94 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ECT2Q9H8V3 914 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 NUDT5Q9UKK9 219 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SH3BP1Q9Y3L3 701 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ATG2BQ96BY7 2078 aa23.48■■□□□ 1.35
PTCHD3P2-201ENST00000424937 BECN2A8MW95 431 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 MDM4O15151 490 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 LETM1O95202 739 aaPredicted RBP23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 NFATC1O95644 943 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ZBED1O96006 694 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 TPM2P07951 284 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 GNA15P30679 374 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ATP5C1P36542 298 aaKnown RBP23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 RGS7P49802 495 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 PON2Q15165 354 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ANO6Q4KMQ2 910 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 C10orf120Q5SQS8 335 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ZNF687Q8N1G0 1237 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 AOPEPQ8N6M6 819 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SHC3Q92529 594 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CLDN23Q96B33 292 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 LSM14BQ9BX40 385 aaKnown RBP23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 DNAJC12Q9UKB3 198 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CACNA1HO95180 2353 aa23.47■■□□□ 1.35
PTCHD3P2-201ENST00000424937 H0Y858 1186 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 SLC9A3R1O14745 358 aaPredicted RBP23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 THAP12O43422 761 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 RALAP11233 206 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 LCP1P13796 627 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 MAGEA9P43362 315 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 KLHL40Q2TBA0 621 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 KIAA1549LQ6ZVL6 1849 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ARHGAP18Q8N392 663 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 KCTD13Q8WZ19 329 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 ACP6Q9NPH0 428 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 CLIC5Q9NZA1 410 aa23.46■■□□□ 1.35
PTCHD3P2-201ENST00000424937 E2F8A0AVK6 867 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 MED7O43513 233 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 GJA4P35212 333 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 RPS9P46781 194 aaKnown RBP23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 YWHAGP61981 247 aaKnown RBP eCLIP23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 KCNMA1Q12791 1236 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 FZD5Q13467 585 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 ANGPT1Q15389 498 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 PMF1Q6P1K2 205 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 TADA2BQ86TJ2 420 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 KIAA1958Q8N8K9 716 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 ANKRD20A12PQ8NF67 263 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 SLC35F5Q8WV83 523 aa23.45■■□□□ 1.34
PTCHD3P2-201ENST00000424937 NDRG1Q92597 394 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms