RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
VRK3-203ENST00000424804 YWHAQP27348 245 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 PMLP29590 882 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 PDE6CP51160 858 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 SEC13P55735 322 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 UBE2HP62256 183 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 TNNC1P63316 161 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 STIM1Q13586 685 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 CRY1Q16526 586 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 CAMK4Q16566 473 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 AASDHQ4L235 1098 aaPredicted RBP13.75□□□□□ -0.21
VRK3-203ENST00000424804 N4BP2L1Q5TBK1 243 aaPredicted RBP13.75□□□□□ -0.21
VRK3-203ENST00000424804 PMS2CLQ68D20 193 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 KLHL10Q6JEL2 608 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 FAM35AQ86V20 835 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 ETFBKMTQ8IXQ9 262 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 FAM186BQ8IYM0 893 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 CRYBG2Q8N1P7 616 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 CCDC33Q8N5R6 958 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 IL17RCQ8NAC3 791 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 MDGA1Q8NFP4 955 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 OVCA2Q8WZ82 227 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
VRK3-203ENST00000424804 ACDQ96AP0 544 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 LSM14BQ9BX40 385 aaKnown RBP13.75□□□□□ -0.21
VRK3-203ENST00000424804 TPSD1Q9BZJ3 242 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 CSNK1G1Q9HCP0 422 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 VPS45Q9NRW7 570 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 HMGXB4Q9UGU5 601 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 ASCC3Q8N3C0 2202 aaKnown RBP13.75□□□□□ -0.21
VRK3-203ENST00000424804 CEP295Q9C0D2 2601 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 FRYQ5TBA9 3013 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 E2F8A0AVK6 867 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 HHLA1C9JL84 531 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 SGK1O00141 431 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 TRIM49P0CI25 452 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 TRIM49CP0CI26 452 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 PSMC2P35998 433 aaKnown RBP13.74□□□□□ -0.21
VRK3-203ENST00000424804 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
VRK3-203ENST00000424804 VAMP7P51809 220 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 DGKEP52429 567 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 SLC5A3P53794 718 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
VRK3-203ENST00000424804 MRPS21P82921 87 aaKnown RBP13.74□□□□□ -0.21
VRK3-203ENST00000424804 NCOA4Q13772 614 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 ZACNQ401N2 412 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 LY6G5CQ5SRR4 150 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 SCARA5Q6ZMJ2 495 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 FRMD1Q8N878 549 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 EXOC4Q96A65 974 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
VRK3-203ENST00000424804 DUSP9Q99956 384 aaKnown RBP13.74□□□□□ -0.21
VRK3-203ENST00000424804 CCSER2Q9H7U1 834 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 ZDHHC4Q9NPG8 344 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 EHD2Q9NZN4 543 aa13.74□□□□□ -0.21
VRK3-203ENST00000424804 TRIM49BA6NDI0 452 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 TRIM24O15164 1050 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 CETN3O15182 167 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 RHOBTB1O94844 696 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 RTN3O95197 1032 aaPredicted RBP13.73□□□□□ -0.21
VRK3-203ENST00000424804 KAT7O95251 611 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 ABL1P00519 1130 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 MBL2P11226 248 aaPredicted RBP13.73□□□□□ -0.21
VRK3-203ENST00000424804 PIK3CAP42336 1068 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 IFRD2Q12894 506 aaPredicted RBP13.73□□□□□ -0.21
VRK3-203ENST00000424804 ORC1Q13415 861 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 ZNF699Q32M78 642 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 SPOPLQ6IQ16 392 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 SV2AQ7L0J3 742 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 ALLCQ8N6M5 410 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 C12orf50Q8NA57 414 aaPredicted RBP13.73□□□□□ -0.21
VRK3-203ENST00000424804 TSTD1Q8NFU3 115 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 FBXO32Q969P5 355 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 SLITRK1Q96PX8 696 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 TWNKQ96RR1 684 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 PNKPQ96T60 521 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 CD248Q9HCU0 757 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 COMMD8Q9NX08 183 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 OSER1Q9NX31 292 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 GMIPQ9P107 970 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 MBD1Q9UIS9 605 aaPredicted RBP13.73□□□□□ -0.21
VRK3-203ENST00000424804 PCNX2A6NKB5 2137 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 CFAP47Q6ZTR5 3102 aa13.73□□□□□ -0.21
VRK3-203ENST00000424804 CEP192Q8TEP8 1941 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 PATE3B3GLJ2 98 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 CDX4O14627 284 aaPredicted RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 PSMA7O14818 248 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 HOXC11O43248 304 aaPredicted RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 KCNK5O95279 499 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 CAVIN2O95810 425 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 ASS1P00966 412 aaKnown RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 EPB41P11171 864 aaKnown RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 ADH5P11766 374 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 CCDC130P13994 396 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TIE1P35590 1138 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms