RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 CDK5RAP1Q96SZ6 601 aaKnown RBP26.69■■□□□ 1.86
TSPAN3-203ENST00000424443 MIS12Q9H081 205 aa26.69■■□□□ 1.86
TSPAN3-203ENST00000424443 NUCKS1Q9H1E3 243 aaKnown RBP26.69■■□□□ 1.86
TSPAN3-203ENST00000424443 SYNCQ9H7C4 482 aa26.69■■□□□ 1.86
TSPAN3-203ENST00000424443 KIF9Q9HAQ2 790 aa26.69■■□□□ 1.86
TSPAN3-203ENST00000424443 NOCTQ9UK39 431 aaKnown RBP26.69■■□□□ 1.86
TSPAN3-203ENST00000424443 NUP210Q8TEM1 1887 aaPredicted RBP26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 HEPACAM2A8MVW5 462 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 OAS1P00973 400 aaKnown RBP26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 YWHAGP61981 247 aaKnown RBP eCLIP26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 TTC16Q8NEE8 873 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 IPO4Q8TEX9 1081 aaKnown RBP26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 SLC20A1Q8WUM9 679 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 PPP1R13BQ96KQ4 1090 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 SLC22A12Q96S37 553 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 RPP25Q9BUL9 199 aaKnown RBP26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 SLC4A5Q9BY07 1137 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 CCSER2Q9H7U1 834 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 OBP2AQ9NY56 170 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 CYTH4Q9UIA0 394 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 MYO10Q9HD67 2058 aa26.68■■□□□ 1.86
TSPAN3-203ENST00000424443 TNFRSF10AO00220 468 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 SART1O43290 800 aaKnown RBP26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 PRAMEF12O95522 483 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 LSM8O95777 96 aaKnown RBP26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 TPM1P09493 284 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 MBL2P11226 248 aaPredicted RBP26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 RARGP13631 454 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 DAOAP59103 153 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 BTBD8Q5XKL5 378 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 SCML4Q8N228 414 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 MSANTD4Q8NCY6 345 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 DEPDC1BQ8WUY9 529 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 IRGQQ8WZA9 623 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 USP13Q92995 863 aaPredicted RBP26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 NMUR1Q9HB89 426 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 SEPT11Q9NVA2 429 aaKnown RBP26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 CLIC5Q9NZA1 410 aa26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 LUC7L2Q9Y383 392 aaKnown RBP26.67■■□□□ 1.86
TSPAN3-203ENST00000424443 E5RJQ4 531 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 COCHO43405 550 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 PSMC3P17980 439 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 ATP5C1P36542 298 aaKnown RBP26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 RPL34P49207 117 aaKnown RBP26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 TRIM14Q14142 442 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 ZNF268Q14587 947 aaPredicted RBP26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 VITQ6UXI7 678 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 TRIM72Q6ZMU5 477 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 RSRC2Q7L4I2 434 aaKnown RBP26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 SCD5Q86SK9 330 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 TMEM110Q86TL2 294 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 MFSD6LQ8IWD5 586 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 SCUBE3Q8IX30 993 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 WDTC1Q8N5D0 677 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 NDRG1Q92597 394 aaKnown RBP26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 PLA2G2FQ9BZM2 168 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 RNF38Q9H0F5 515 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 CAPN11Q9UMQ6 739 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 NCOR1O75376 2440 aa26.66■■□□□ 1.86
TSPAN3-203ENST00000424443 DCXO43602 365 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 ALADP13716 330 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 PGFP49763 221 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 ZBED6P86452 979 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 VSTM4Q8IW00 320 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 UBALD2Q8IYN6 164 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 BPIFB1Q8TDL5 484 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 CPXM1Q96SM3 734 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 TRMT61BQ9BVS5 477 aaKnown RBP26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 THG1LQ9NWX6 298 aaKnown RBP26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 OSER1Q9NX31 292 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 AIPL1Q9NZN9 384 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 ARHGAP26Q9UNA1 814 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 CCL26Q9Y258 94 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 OLFM2O95897 454 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 CDH5P33151 784 aaPredicted RBP26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 SLC7A9P82251 487 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 FMO1Q01740 532 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 GRM2Q14416 872 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 C10orf120Q5SQS8 335 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 IRF2BP2Q7Z5L9 587 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 ERICH1Q86X53 443 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 RNF139Q8WU17 664 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 AGPAT1Q99943 283 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 ABCC13Q9NSE7 274 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 CPQQ9Y646 472 aa26.65■■□□□ 1.86
TSPAN3-203ENST00000424443 YJEFN3A6XGL0 299 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 E7ENQ6 273 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 GABBR2O75899 941 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 GYPCP04921 128 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 CASP14P31944 242 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 BSPRYQ5W0U4 402 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 CC2D1AQ6P1N0 951 aaPredicted RBP26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 FAM149B1Q96BN6 582 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 BRD9Q9H8M2 597 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 SMPD4Q9NXE4 827 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 DNMT3LQ9UJW3 386 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 DUSP12Q9UNI6 340 aa26.64■■□□□ 1.85
TSPAN3-203ENST00000424443 TTC28Q96AY4 2481 aa26.63■■□□□ 1.85
TSPAN3-203ENST00000424443 SRFP11831 508 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms