RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 MYO1FO00160 1098 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 KIF5CO60282 957 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 GRAP2O75791 330 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 LTFP02788 710 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 HNRNPA1P09651 372 aaKnown RBP eCLIP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 HMGA1P17096 107 aaKnown RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 HOXA9P31269 272 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 RFC1P35251 1148 aaPredicted RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 RNASE9P60153 205 aaKnown RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 RPL7AP62424 266 aaKnown RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 TAF5Q15542 800 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 DNAJB7Q7Z6W7 309 aaPredicted RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 PDZD8Q8NEN9 1154 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 JOSD2Q8TAC2 188 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 FNIP1Q8TF40 1166 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 TRMT2BQ96GJ1 504 aaKnown RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 MYRFLQ96LU7 910 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 ZNF512Q96ME7 567 aaPredicted RBP16.72■□□□□ 0.27
ABCA1-203ENST00000423487 ALS2CR12Q96Q35 445 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 POPDC2Q9HBU9 364 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 ZDHHC7Q9NXF8 308 aa16.72■□□□□ 0.27
ABCA1-203ENST00000423487 LAMA2P24043 3122 aaKnown RBP16.71■□□□□ 0.27
ABCA1-203ENST00000423487 SPDYE4A6NLX3 237 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 SOX1O00570 391 aaPredicted RBP16.71■□□□□ 0.27
ABCA1-203ENST00000423487 DAB1O75553 588 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 MOCS3O95396 460 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 DESP17661 470 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 PSEN1P49768 467 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 YWHAGP61981 247 aaKnown RBP eCLIP16.71■□□□□ 0.27
ABCA1-203ENST00000423487 TAF10Q12962 218 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 GRIN2CQ14957 1233 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 BHLHA9Q7RTU4 235 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 TPCN2Q8NHX9 752 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 OVCA2Q8WZ82 227 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 CASP10Q92851 521 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 TLR8Q9NR97 1041 aaKnown RBP16.71■□□□□ 0.27
ABCA1-203ENST00000423487 IP6K2Q9UHH9 426 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 COL4A4P53420 1690 aaPredicted RBP16.71■□□□□ 0.27
ABCA1-203ENST00000423487 PATJQ8NI35 1801 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 TRIOBPQ9H2D6 2365 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 CHD9Q3L8U1 2897 aa16.71■□□□□ 0.27
ABCA1-203ENST00000423487 MYO7AQ13402 2215 aa16.71■□□□□ 0.26
ABCA1-203ENST00000423487 C2CD4BA6NLJ0 364 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 ESPNB1AK53 854 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 CAPN9O14815 690 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 SRGAP2BP0DMP2 458 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 PDGFRAP16234 1089 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 GPD1P21695 349 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 FLT3P36888 993 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 TCEAL5Q5H9L2 206 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 BSPRYQ5W0U4 402 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 BTBD8Q5XKL5 378 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 HFE2Q6ZVN8 426 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 SYCE1Q8N0S2 351 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 DEFB106AQ8N104 65 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 EMC1Q8N766 993 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 TRIM58Q8NG06 486 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 RXFP2Q8WXD0 754 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 SLC2A13Q96QE2 648 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 DZANK1Q9NVP4 752 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
ABCA1-203ENST00000423487 GMIPQ9P107 970 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 PLXNA3P51805 1871 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 A0A1W2PQH9 124 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 CCL16O15467 120 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 XYLBO75191 536 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 RFPL2O75678 378 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 POU2F2P09086 479 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 POU3F3P20264 500 aaPredicted RBP16.7■□□□□ 0.26
ABCA1-203ENST00000423487 SDC4P31431 198 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 NOS2P35228 1153 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 MATKP42679 507 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 PPP3CCP48454 512 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 ZNF143P52747 638 aaPredicted RBP16.7■□□□□ 0.26
ABCA1-203ENST00000423487 KCNC3Q14003 757 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 PIGHQ14442 188 aaPredicted RBP16.7■□□□□ 0.26
ABCA1-203ENST00000423487 MESDQ14696 234 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 C11orf63Q6NUN7 778 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 SCD5Q86SK9 330 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
ABCA1-203ENST00000423487 TRIM7Q9C029 511 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 IGFLR1Q9H665 355 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 CLIC5Q9NZA1 410 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 STAP1Q9ULZ2 295 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 CAPN6Q9Y6Q1 641 aa16.7■□□□□ 0.26
ABCA1-203ENST00000423487 LAMA3Q16787 3333 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 GRID2IPA4D2P6 1211 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 DPYSL4O14531 572 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 BUB1BO60566 1050 aaPredicted RBP16.69■□□□□ 0.26
ABCA1-203ENST00000423487 PALMO75781 387 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 PROSCO94903 275 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 ZDHHC11BP0C7U3 371 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 RALAP11233 206 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 PSMA2P25787 234 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 PTPN9P43378 593 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 ACAP1Q15027 740 aa16.69■□□□□ 0.26
ABCA1-203ENST00000423487 PABPC1LQ4VXU2 614 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms