RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NR2E1Q9Y466 385 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 CEP83Q9Y592 693 aa9.76□□□□□ -0.85
PDGFC-202ENST00000422544 MYO10Q9HD67 2058 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 A0A1W2PQH9 124 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 C2orf78A6NCI8 922 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 LOC730098B7Z3J9 87 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ADCY5O95622 1261 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ZBED1O96006 694 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ZDHHC11BP0C7U3 371 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 PPP3CCP48454 512 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 RPL34P49207 117 aaKnown RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ADKP55263 362 aaKnown RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 KLHL30Q0D2K2 578 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 PDCLQ13371 301 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 TRIM14Q14142 442 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 FAM78AQ5JUQ0 283 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 NAA35Q5VZE5 725 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 PM20D1Q6GTS8 502 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 CCDC186Q7Z3E2 898 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SCD5Q86SK9 330 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 TMEM110Q86TL2 294 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 MON1AQ86VX9 555 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 FMNL3Q8IVF7 1028 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ZDHHC14Q8IZN3 488 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SIX6OS1Q8N1H7 587 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 PDZD8Q8NEN9 1154 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ZSCAN18Q8TBC5 510 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 CLEC4CQ8WTT0 213 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 CPA5Q8WXQ8 436 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 OVCA2Q8WZ82 227 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SYN2Q92777 582 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 MRFAP1L1Q96HT8 127 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 PPP1R13BQ96KQ4 1090 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SLC22A12Q96S37 553 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 CPXM1Q96SM3 734 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 CYP2S1Q96SQ9 504 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SMG9Q9H0W8 520 aaKnown RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 NUCKS1Q9H1E3 243 aaKnown RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 NMUR1Q9HB89 426 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 TLR8Q9NR97 1041 aaKnown RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 SEPT11Q9NVA2 429 aaKnown RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 OSER1Q9NX31 292 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 EPS15L1Q9UBC2 864 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 TJP2Q9UDY2 1190 aa9.75□□□□□ -0.85
PDGFC-202ENST00000422544 ZFP37Q9Y6Q3 630 aaPredicted RBP9.75□□□□□ -0.85
PDGFC-202ENST00000422544 NOTCH4Q99466 2003 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 YJEFN3A6XGL0 299 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 E5RJQ4 531 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 E7ENQ6 273 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 PAPSS1O43252 624 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 LSM8O95777 96 aaKnown RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 TBX18O95935 607 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 ERBB2P04626 1255 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 CYP1A1P04798 512 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 TPM1P09493 284 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 RARGP13631 454 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 HDCP19113 662 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 TNFAIP3P21580 790 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 DDX6P26196 483 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 CDH5P33151 784 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 VIPR2P41587 438 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 PRKCIP41743 596 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 ACADSBP45954 432 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 YWHAGP61981 247 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 NOMO3P69849 1222 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 TBX2Q13207 712 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 PTPN20Q4JDL3 420 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 HECTD3Q5T447 861 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 SNX30Q5VWJ9 437 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 PARM1Q6UWI2 310 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 TRIM72Q6ZMU5 477 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 BHLHA9Q7RTU4 235 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 ZNF571Q7Z3V5 609 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 ARID3BQ8IVW6 561 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 CMTM8Q8IZV2 173 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 GJD3Q8N144 294 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 ARL14EPQ8N8R7 260 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 PRSS33Q8NF86 280 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 OR8K1Q8NGG5 319 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 SLC30A5Q8TAD4 765 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 RSAD2Q8WXG1 361 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 SMARCD2Q92925 531 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 ASB16Q96NS5 453 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 NOX5Q96PH1 765 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 SYT11Q9BT88 431 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 RPP25Q9BUL9 199 aaKnown RBP9.74□□□□□ -0.85
PDGFC-202ENST00000422544 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 SYNCQ9H7C4 482 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 CCSER2Q9H7U1 834 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 CNGB3Q9NQW8 809 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 NUDT5Q9UKK9 219 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 NCANO14594 1321 aa9.74□□□□□ -0.85
PDGFC-202ENST00000422544 TRAV19A0A0A6YYK7 116 aa9.73□□□□□ -0.85
PDGFC-202ENST00000422544 GOLGA6L3A6NEY3 463 aa9.73□□□□□ -0.85
PDGFC-202ENST00000422544 AKR1B15C9JRZ8 316 aaPredicted RBP9.73□□□□□ -0.85
PDGFC-202ENST00000422544 ANHXE9PGG2 379 aa9.73□□□□□ -0.85
PDGFC-202ENST00000422544 COCHO43405 550 aa9.73□□□□□ -0.85
PDGFC-202ENST00000422544 MFAP3LO75121 409 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms