RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TUBB4AP04350 444 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PRKCBP05771 671 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 KRT18P05783 430 aaKnown RBP3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 KCNA3P22001 575 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 MSNP26038 577 aaKnown RBP3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 MTHFSP49914 203 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PDE1AP54750 535 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 TPTEP56180 551 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCDC173Q0VFZ6 552 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 TBC1D25Q3MII6 688 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 TREML2Q5T2D2 321 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 CERCAMQ5T4B2 595 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 CACHD1Q5VU97 1274 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 ANKRD16Q6P6B7 361 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZSCAN30Q86W11 494 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 MICU3Q86XE3 530 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 KRT78Q8N1N4 520 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 LRRC71Q8N4P6 559 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PRSS3P2Q8NHM4 247 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 TBC1D5Q92609 795 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PPP2R3CQ969Q6 453 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 TIFAQ96CG3 184 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 MSLNLQ96KJ4 702 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 STK31Q9BXU1 1019 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 VPS16Q9H269 839 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 DHX36Q9H2U1 1008 aaKnown RBP3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 FAM83DQ9H4H8 585 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 DDX21Q9NR30 783 aaKnown RBP eCLIP3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 TUBA8Q9NY65 449 aaPredicted RBP3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 RGS17Q9UGC6 210 aaPredicted RBP3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 ITGB1BP2Q9UKP3 347 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 SSX2IPQ9Y2D8 614 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 PCDHGB6Q9Y5F9 930 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 ERICH3Q5RHP9 1530 aa3.94□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCDC88BA6NC98 1476 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 KTN1Q86UP2 1357 aaKnown RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 TONSLQ96HA7 1378 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RAB3GAP2Q9H2M9 1393 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 A1L4Q6 167 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 AQP7P3A6NL99 342 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RHPN2P1A8MT19 583 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 TMEM233B4DJY2 109 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 PRRT4C9JH25 899 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 hCG_1984214I3L0E3 225 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RGS10O43665 173 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RASAL1O95294 804 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 NBPF7P0C2Y1 421 aaPredicted RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 PHKG2P15735 406 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SCP2P22307 547 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 ARHGAP25P42331 645 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 NR4A2P43354 598 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RPS16P62249 146 aaKnown RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 CCNIQ14094 377 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 ARHGEF7Q14155 803 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SLC29A2Q14542 456 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SAFBQ15424 915 aaKnown RBP eCLIP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 COBLL1Q53SF7 1204 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 C3orf38Q5JPI3 329 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 AARS2Q5JTZ9 985 aaKnown RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 DEPDC1Q5TB30 811 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RUSC1-AS1Q66K80 236 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 MIS18BP1Q6P0N0 1132 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 MZT2AQ6P582 158 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 MTHFD1LQ6UB35 978 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 COL23A1Q86Y22 540 aaPredicted RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 OR56A3Q8NH54 315 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 RP9Q8TA86 221 aaKnown RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 MAML1Q92585 1016 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 GLG1Q92896 1179 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SECISBP2LQ93073 1101 aaKnown RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZNF668Q96K58 619 aaPredicted RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 DPCDQ9BVM2 203 aaPredicted RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SARGQ9BW04 601 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SPRTNQ9H040 489 aaPredicted RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 CXorf36Q9H7Y0 433 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 YY1AP1Q9H869 796 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 GRPEL1Q9HAV7 217 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 STK32BQ9NY57 414 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 ZNF580Q9UK33 172 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 MRPS17Q9Y2R5 130 aaKnown RBP3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 CDY1Q9Y6F8 540 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 AKNAQ7Z591 1439 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 SCAPERQ9BY12 1400 aa3.93□□□□□ -1.78
SDCBPP3-201ENST00000419629 NINLQ9Y2I6 1382 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 INSIG1O15503 277 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 THAP12O43422 761 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 PRC1O43663 620 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 MYL1P05976 194 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 FESP07332 822 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 PDHA1P08559 390 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 IL6RP08887 468 aaPredicted RBP3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 NPSP0C0P6 89 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 TXNP10599 105 aaKnown RBP3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 TRIM27P14373 513 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 TPH1P17752 444 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 ACVR2AP27037 513 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 EPHA3P29320 983 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 MCM5P33992 734 aa3.92□□□□□ -1.78
SDCBPP3-201ENST00000419629 LIPAP38571 399 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms