RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 VITQ6UXI7 678 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 IRF2BP2Q7Z5L9 587 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SIX6OS1Q8N1H7 587 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 ARL14EPQ8N8R7 260 aaPredicted RBP18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TMEM35BQ8NCS4 154 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 USP13Q92995 863 aaPredicted RBP18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 NOX5Q96PH1 765 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SLC22A12Q96S37 553 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CYP2S1Q96SQ9 504 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 PLA2G2FQ9BZM2 168 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 RNF38Q9H0F5 515 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 NUCKS1Q9H1E3 243 aaKnown RBP18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 NMUR1Q9HB89 426 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SLC2A4RGQ9NR83 387 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CYTH4Q9UIA0 394 aa18.42■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 A0A1W2PQH9 124 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 DPYSL4O14531 572 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SART1O43290 800 aaKnown RBP18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 PRAMEF12O95522 483 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 ABL1P00519 1130 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CKMP06732 381 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SRFP11831 508 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 VIPR2P41587 438 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 PGFP49763 221 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 RGS7P49802 495 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SNX16P57768 344 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 DAOAP59103 153 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 ZXDAP98168 799 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 PDCLQ13371 301 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TADA2BQ86TJ2 420 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 RSPRY1Q96DX4 576 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TRPC7Q9HCX4 862 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TRPV5Q9NQA5 729 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 OSER1Q9NX31 292 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CAPN11Q9UMQ6 739 aa18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■■□□ 17.6
COMMD3-BMI1-201ENST00000417470 NUP210Q8TEM1 1887 aaPredicted RBP18.41■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 COCHO43405 550 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TLR5O60602 858 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CYP1A1P04798 512 aaPredicted RBP18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 RALAP11233 206 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 RARGP13631 454 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 LCP1P13796 627 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CHRNB2P17787 502 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 PRKCIP41743 596 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 YWHAGP61981 247 aaKnown RBP eCLIP18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TRIM72Q6ZMU5 477 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 BEND5Q7L4P6 421 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 BPIFB1Q8TDL5 484 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 EDAQ92838 391 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 KHSRPQ92945 711 aaKnown RBP eCLIP18.4■□□□□ 0.542e-7■■■■■ 27.5
COMMD3-BMI1-201ENST00000417470 PPP1R13BQ96KQ4 1090 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 LRRC3BQ96PB8 259 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 KXD1Q9BQD3 176 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 TRMT61BQ9BVS5 477 aaKnown RBP18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 PDCL3Q9H2J4 239 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 CCSER2Q9H7U1 834 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 NAGPAQ9UK23 515 aa18.4■□□□□ 0.54
COMMD3-BMI1-201ENST00000417470 LRRC53A6NM62 1247 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 CHADO15335 359 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 MMEP08473 750 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ATP5C1P36542 298 aaKnown RBP18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 GABRB2P47870 512 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ZBED6P86452 979 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 FMO1Q01740 532 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 USP4Q13107 963 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ZNF77Q15935 545 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 SPECC1LQ69YQ0 1117 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 DDX42Q86XP3 938 aaKnown RBP eCLIP18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 C1orf131Q8NDD1 294 aaKnown RBP18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ZNF397Q8NF99 534 aaPredicted RBP18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 SYT11Q9BT88 431 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ST7Q9NRC1 585 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ABCC13Q9NSE7 274 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 CCL26Q9Y258 94 aa18.39■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 YJEFN3A6XGL0 299 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 E5RJQ4 531 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 E7ENQ6 273 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 PAPSS1O43252 624 aaPredicted RBP18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 GLI1P08151 1106 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 NOMO3P69849 1222 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ZXDBP98169 803 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 PLCB2Q00722 1185 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 PFKPQ01813 784 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 TRIM14Q14142 442 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ARHGAP29Q52LW3 1261 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 SFMBT2Q5VUG0 894 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 TAF3Q5VWG9 929 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 BSPRYQ5W0U4 402 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ZDHHC17Q8IUH5 632 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 PASD1Q8IV76 773 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 VSTM4Q8IW00 320 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 SCUBE3Q8IX30 993 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 SLC20A1Q8WUM9 679 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 IRF7Q92985 503 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 ZFRQ96KR1 1074 aaKnown RBP18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 CPXM1Q96SM3 734 aa18.38■□□□□ 0.53
COMMD3-BMI1-201ENST00000417470 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms