RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 SLC9A3R1O14745 358 aaPredicted RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 TBX18O95935 607 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 ZBED1O96006 694 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 GLULP15104 373 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 TARSP26639 723 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 PSEN1P49768 467 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 TUBP50607 506 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 SLC7A9P82251 487 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 ADIGQ0VDE8 80 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 USP4Q13107 963 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 RUNX3Q13761 415 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 NFKBIBQ15653 356 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 CNGA2Q16280 664 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 LCLAT1Q6UWP7 414 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 DTWD2Q8NBA8 298 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 RNF139Q8WU17 664 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 OSCP1Q8WVF1 389 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 EXOC4Q96A65 974 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 CDK5RAP1Q96SZ6 601 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 ULBP1Q9BZM6 244 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 UBXN6Q9BZV1 441 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 SPATA6Q9NWH7 488 aaPredicted RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 IL37Q9NZH6 218 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 RASAL2Q9UJF2 1139 aa11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 LSM7Q9UK45 103 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 MTF2Q9Y483 593 aaPredicted RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 NUP210Q8TEM1 1887 aaPredicted RBP11.63□□□□□ -0.55
TM9SF4-203ENST00000417389 FAM92AA1XBS5 289 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 SMTNL1A8MU46 457 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 MDM4O15151 490 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 NFATC1O95644 943 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 HMBSP08397 361 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 CTHP32929 405 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 KRT9P35527 623 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 PGFP49763 221 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 COPB1P53618 953 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 PTPN5P54829 565 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 YWHAGP61981 247 aaKnown RBP eCLIP11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 PTK2Q05397 1052 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 EFEMP1Q12805 493 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 PON2Q15165 354 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 SKOR2Q2VWA4 1001 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 CDKAL1Q5VV42 579 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 SNX30Q5VWJ9 437 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 BTBD8Q5XKL5 378 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 CCDC186Q7Z3E2 898 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 RALGPS2Q86X27 583 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 RIN3Q8TB24 985 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 NDRG1Q92597 394 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 MSANTD3Q96H12 275 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 FAM83CQ9BQN1 747 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 MIS12Q9H081 205 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 LINC00597Q9H2U6 94 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 NMUR1Q9HB89 426 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 FAM207AQ9NSI2 230 aaPredicted RBP11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 DNMT3LQ9UJW3 386 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
TM9SF4-203ENST00000417389 TICRRQ7Z2Z1 1910 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 H0Y858 1186 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ARNTLO00327 626 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 GALR2O43603 387 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 OLFM2O95897 454 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ZDHHC11BP0C7U3 371 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 PNMA6AP0CW24 399 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 PLA2G4AP47712 749 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ZNF165P49910 485 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ZNF132P52740 706 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 TPM4P67936 248 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 UBXN1Q04323 297 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 GRSF1Q12849 480 aaKnown RBP eCLIP11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 LRRC32Q14392 662 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 DENND1BQ6P3S1 775 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 SCD5Q86SK9 330 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 PASD1Q8IV76 773 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 CCDC105Q8IYK2 499 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 EDEM1Q92611 657 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ATOH1Q92858 354 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 DDX23Q9BUQ8 820 aaKnown RBP11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 SYNCQ9H7C4 482 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ECT2Q9H8V3 914 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 LMAN1LQ9HAT1 526 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 SIX2Q9NPC8 291 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 ACP6Q9NPH0 428 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 HPS4Q9NQG7 708 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 OSER1Q9NX31 292 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 TBC1D14Q9P2M4 693 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 FHOD1Q9Y613 1164 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 USP3Q9Y6I4 520 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 COL4A3Q01955 1670 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 OBSL1O75147 1896 aa11.61□□□□□ -0.55
TM9SF4-203ENST00000417389 GREB1Q4ZG55 1949 aa11.6□□□□□ -0.55
TM9SF4-203ENST00000417389 MUC6Q6W4X9 2439 aa11.6□□□□□ -0.55
TM9SF4-203ENST00000417389 E2F8A0AVK6 867 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms