RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ITGA9Q13797 1035 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 NAPEPLDQ6IQ20 393 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 TATDN2Q93075 761 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PPP2R3CQ969Q6 453 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 DGCR6LQ9BY27 220 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 CATSPERBQ9H7T0 1116 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 GOLGA8TH3BQL2 631 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 VWA5AO00534 786 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 TRAPPC3O43617 180 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PPATQ06203 517 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ADRM1Q16186 407 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 VN1R5Q7Z5H4 357 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 JADE3Q92613 823 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 FICDQ9BVA6 458 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 BTBD7Q9P203 1132 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 USP18Q9UMW8 372 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 E7ENQ6 273 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 H2AFYO75367 372 aaKnown RBP12.42□□□□□ -0.42
UBR4-205ENST00000417040 KATNA1O75449 491 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 AKAP3O75969 853 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 GSTT1P30711 240 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 ATP6AP1LQ52LC2 224 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 DGKKQ5KSL6 1271 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 PTAR1Q7Z6K3 402 aaPredicted RBP12.42□□□□□ -0.42
UBR4-205ENST00000417040 KIAA0895Q8NCT3 520 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 MAGED4Q96JG8 741 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 WDCPQ9H6R7 721 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
UBR4-205ENST00000417040 NDUFA13Q9P0J0 144 aa12.42□□□□□ -0.42
UBR4-205ENST00000417040 REREQ9P2R6 1566 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 TBX3O15119 743 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 SOAT2O75908 522 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 TOMM70O94826 608 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PSMG1O95456 288 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PBLDP30039 288 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 CSTF3Q12996 717 aaKnown RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 TAF5Q15542 800 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 KBTBD12Q3ZCT8 623 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ALFQ53S48 1182 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 C19orf18Q8NEA5 215 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 CAPSLQ8WWF8 208 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 KIAA1683Q9H0B3 1180 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ELP3Q9H9T3 547 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ZSCAN32Q9NX65 697 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■□□□□ 10.5
UBR4-205ENST00000417040 TRMT6Q9UJA5 497 aaKnown RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 SPATA2Q9UM82 520 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 GTF2A1LQ9UNN4 478 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 CROCC2H7BZ55 1655 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 BANF1O75531 89 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ZSCAN5DPP0CG00 497 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ELK3P41970 407 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 NT5C2P49902 561 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 SLC26A11Q86WA9 606 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 FOPNLQ96NB1 174 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 SLC7A5P2Q9GIP4 190 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 DYRK4Q9NR20 520 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 DPP3Q9NY33 737 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ABT1Q9ULW3 272 aaKnown RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 F8W810 466 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 LTFP02788 710 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 MGAT5BQ3V5L5 792 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 C16orf46Q6P387 395 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 TMPRSS6Q8IU80 811 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ATG16L2Q8NAA4 619 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 SCFD2Q8WU76 684 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 RMND5BQ96G75 393 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PHGDHO43175 533 aaKnown RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 TADA2AO75478 443 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 FSBPO95073 299 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 ABCB1P08183 1280 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 PEX5P50542 639 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 KYQ8NBH2 561 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 SPRTNQ9H040 489 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 NMRK2Q9NPI5 230 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 KCND2Q9NZV8 630 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 IGSF9BQ9UPX0 1349 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 HEATR9A2RTY3 570 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PIAS1O75925 651 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PGM3O95394 542 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 PROCP04070 461 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 RARAP10276 462 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 CACHD1Q5VU97 1274 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 COLGALT1Q8NBJ5 622 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 TBC1D16Q8TBP0 767 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 UTP15Q8TED0 518 aaKnown RBP12.41□□□□□ -0.42
UBR4-205ENST00000417040 TPD52L3Q96J77 140 aa12.41□□□□□ -0.42
UBR4-205ENST00000417040 CDRT15Q96T59 188 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms