RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 KIF11P52732 1056 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 CBWD6Q4V339 395 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 ZNF394Q53GI3 561 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 CBWD3Q5JTY5 395 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 CBWD5Q5RIA9 395 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 PPP1R26Q5T8A7 1209 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-210ENST00000416778 ISM2Q6H9L7 571 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 SLC4A11Q8NBS3 891 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 USP33Q8TEY7 942 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 KLF16Q9BXK1 252 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-210ENST00000416778 PNPLA8Q9NP80 782 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 TLR8Q9NR97 1041 aaKnown RBP18.88■□□□□ 0.61
CPNE1-210ENST00000416778 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
CPNE1-210ENST00000416778 HOOK1Q9UJC3 728 aaKnown RBP18.88■□□□□ 0.61
CPNE1-210ENST00000416778 TRIM49BA6NDI0 452 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 GREM1O60565 184 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 TLR5O60602 858 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 CD44P16070 742 aaKnown RBP18.87■□□□□ 0.61
CPNE1-210ENST00000416778 ACO1P21399 889 aaKnown RBP18.87■□□□□ 0.61
CPNE1-210ENST00000416778 RAD23BP54727 409 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 LRRC63Q05C16 580 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 MESP2Q0VG99 397 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 HTR3DQ70Z44 454 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 TTC39CQ8N584 583 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 CCDC26Q8TAB7 109 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 OTUB2Q96DC9 234 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 TMEM176AQ96HP8 235 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 DHTKD1Q96HY7 919 aaPredicted RBP18.87■□□□□ 0.61
CPNE1-210ENST00000416778 UBXN6Q9BZV1 441 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 FAM124BQ9H5Z6 455 aaPredicted RBP18.87■□□□□ 0.61
CPNE1-210ENST00000416778 NMUR1Q9HB89 426 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 CYLDQ9NQC7 956 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 DLL3Q9NYJ7 618 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 GMEB2Q9UKD1 530 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 MAN1B1Q9UKM7 699 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 USP3Q9Y6I4 520 aa18.87■□□□□ 0.61
CPNE1-210ENST00000416778 GADD45BO75293 160 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-210ENST00000416778 BMP6P22004 513 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 LY6G5CQ5SRR4 150 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 SCD5Q86SK9 330 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 BBS7Q8IWZ6 715 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 ZNF276Q8N554 614 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 SLC35C1Q96A29 364 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 PNKPQ96T60 521 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 ARID3AQ99856 593 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 DNAI2Q9GZS0 605 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 ARMCX3Q9UH62 379 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-210ENST00000416778 EBF1Q9UH73 591 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 SH3BP1Q9Y3L3 701 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 DNAH14Q0VDD8 3507 aa18.86■□□□□ 0.61
CPNE1-210ENST00000416778 PPP1R3GB7ZBB8 358 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 CYP26A1O43174 497 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 CHRM1P11229 460 aaPredicted RBP18.85■□□□□ 0.61
CPNE1-210ENST00000416778 ATP5C1P36542 298 aaKnown RBP18.85■□□□□ 0.61
CPNE1-210ENST00000416778 EIF2DP41214 584 aaKnown RBP18.85■□□□□ 0.61
CPNE1-210ENST00000416778 FOXK2Q01167 660 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 SPEM2Q0P670 501 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 DMC1Q14565 340 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 RSPO4Q2I0M5 234 aaPredicted RBP18.85■□□□□ 0.61
CPNE1-210ENST00000416778 C2orf27AQ580R0 203 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 TCERG1LQ5VWI1 586 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 ARHGAP17Q68EM7 881 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 CEP68Q76N32 757 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 ERMP1Q7Z2K6 904 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 C12orf40Q86WS4 652 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 TMEM25Q86YD3 366 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 SFTPA1Q8IWL2 248 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 FAM160A2Q8N612 972 aaPredicted RBP18.85■□□□□ 0.61
CPNE1-210ENST00000416778 JAKMIP2Q96AA8 810 aa18.85■□□□□ 0.61
CPNE1-210ENST00000416778 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.85■□□□□ 0.61
CPNE1-210ENST00000416778 A0A1W2PQH9 124 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 RPP40O75818 363 aaKnown RBP18.84■□□□□ 0.61
CPNE1-210ENST00000416778 ADH1CP00326 375 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 ADH5P11766 374 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 RARGP13631 454 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 MRPS21P82921 87 aaKnown RBP18.84■□□□□ 0.61
CPNE1-210ENST00000416778 GAD2Q05329 585 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 PUM1Q14671 1186 aaKnown RBP eCLIP18.84■□□□□ 0.61
CPNE1-210ENST00000416778 DCAF17Q5H9S7 520 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-210ENST00000416778 EMC10Q5UCC4 262 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 KLHDC10Q6PID8 442 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 CACNA2D4Q7Z3S7 1137 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 PHTF2Q8N3S3 785 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 ANKRD52Q8NB46 1076 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 HHIPQ96QV1 700 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 NACA2Q9H009 215 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 METTL14Q9HCE5 456 aaKnown RBP18.84■□□□□ 0.61
CPNE1-210ENST00000416778 NUDT5Q9UKK9 219 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 SDK1Q7Z5N4 2213 aa18.84■□□□□ 0.61
CPNE1-210ENST00000416778 CACNA1AO00555 2505 aa18.83■□□□□ 0.61
CPNE1-210ENST00000416778 PRR5-ARHGAP8B1AHC4 643 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 PSMA7O14818 248 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 AXIN1O15169 862 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 PMM2O15305 246 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 LRP3O75074 770 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 KAT7O95251 611 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 GRIA2P42262 883 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 TNFRSF4P43489 277 aa18.83■□□□□ 0.6
CPNE1-210ENST00000416778 PLA2G4AP47712 749 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms