RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 BAG4O95429 457 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 CKMP06732 381 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 XRCC6P12956 609 aaKnown RBP eCLIP9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 CYP2F1P24903 491 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 TUFMP49411 452 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 ATP2C1P98194 919 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 CCDC173Q0VFZ6 552 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 DHCR24Q15392 516 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 CALCRLQ16602 461 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 HLA-BQ31612 363 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 WSCD1Q658N2 575 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 MPZL3Q6UWV2 235 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 LAYNQ6UX15 382 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 DBX2Q6ZNG2 339 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 GPR155Q7Z3F1 870 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 SLFN12Q8IYM2 578 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 ADGRG2Q8IZP9 1017 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 WBP2Q969T9 261 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 GRIP2Q9C0E4 1043 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 TM7SF3Q9NS93 570 aa9.31□□□□□ -0.92
NIF3L1-206ENST00000416651 A0A1B0GVT2 93 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 ARHGEF35A5YM69 484 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 WASH3PC4AMC7 463 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 LEFTY2O00292 366 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 SLC16A4O15374 487 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 RPS6KB1P23443 525 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 DDX6P26196 483 aaKnown RBP eCLIP9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 EFNA5P52803 228 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 MAPK7Q13164 816 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 TAF1BQ53T94 588 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 KCNT1Q5JUK3 1230 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 EOGTQ5NDL2 527 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 LSM14AQ8ND56 463 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 NAF1Q96HR8 494 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 PNKPQ96T60 521 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 MRPL4Q9BYD3 311 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 MIR1-1HGQ9H1L0 117 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 BHMT2Q9H2M3 363 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 CPNE5Q9HCH3 593 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 ARHGEF4Q9NR80 690 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 ARHGAP28Q9P2N2 729 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
NIF3L1-206ENST00000416651 A0A0A0MRY4 1105 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 TRAV19A0A0A6YYK7 116 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 KCNJ18B7U540 433 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 B8ZZF3 427 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 CAPN9O14815 690 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 SLC28A2O43868 658 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 NOL4O94818 638 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 NFATC1O95644 943 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 NFICP08651 508 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 ACAT1P24752 427 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 SCTRP47872 440 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 EVCP57679 992 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 IL9RQ01113 521 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 TLE3Q04726 772 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 POU4F2Q12837 409 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 DNAJC3Q13217 504 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 C9orf57Q5W0N0 161 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 LMBRD2Q68DH5 695 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 BLOC1S2Q6QNY1 142 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 USP49Q70CQ1 688 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 SPACA3Q8IXA5 215 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 KCNB2Q92953 911 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 IFT74Q96LB3 600 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 RUSC1Q9BVN2 902 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 SMPD4Q9NXE4 827 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 HSFX1Q9UBD0 423 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 PCDHB11Q9Y5F2 797 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 AK5Q9Y6K8 562 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 STK36Q9NRP7 1315 aa9.29□□□□□ -0.92
NIF3L1-206ENST00000416651 NUMA1Q14980 2115 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 TEX51A0A1B0GUA7 166 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 E9PMD0 336 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 PIRO00625 290 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 CYB561D2O14569 222 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 FAM189A1O60320 539 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 HIP1RO75146 1068 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 APODP05090 189 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 CYP11A1P05108 521 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 ODC1P11926 461 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 HLA-EP13747 358 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 HOXB2P14652 356 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 HDCP19113 662 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 DPP6P42658 865 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 CSNK1EP49674 416 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 NFKB2Q00653 900 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 RESTQ13127 1097 aa9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 TARDBPQ13148 414 aaKnown RBP eCLIP9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 NOLC1Q14978 699 aaKnown RBP eCLIP9.28□□□□□ -0.92
NIF3L1-206ENST00000416651 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms