RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 KCNK16Q96T55 309 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 ATXN2Q99700 1313 aaKnown RBP15.26■□□□□ 0.03
SGCE-202ENST00000415788 SYT11Q9BT88 431 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 TMEM30AQ9NV96 361 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 COMMD8Q9NX08 183 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 CLDND1Q9NY35 253 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 GOLGA6AQ9NYA3 693 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 CHD9Q3L8U1 2897 aa15.26■□□□□ 0.03
SGCE-202ENST00000415788 SSU72P8A0A1W2PR75 194 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 LINC01565O15544 149 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 SOAT2O75908 522 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 CSH1P0DML2 217 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 CSH2P0DML3 217 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 CHRNB2P17787 502 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 TNFAIP3P21580 790 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 SNX16P57768 344 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 WDR59Q6PJI9 974 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 PIGZQ86VD9 579 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 AENQ8WTP8 325 aaKnown RBP15.25■□□□□ 0.03
SGCE-202ENST00000415788 KCTD13Q8WZ19 329 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 PSMG2Q969U7 264 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 PRKD2Q9BZL6 878 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 CYLDQ9NQC7 956 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 CHD7Q9P2D1 2997 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 MYO7AQ13402 2215 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 AGPSO00116 658 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 RTN3O95197 1032 aaPredicted RBP15.25■□□□□ 0.03
SGCE-202ENST00000415788 CYP1A1P04798 512 aaPredicted RBP15.25■□□□□ 0.03
SGCE-202ENST00000415788 PRLRP16471 622 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 ACADSBP45954 432 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 GPR15P49685 360 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 DENND5BQ6ZUT9 1274 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 ZNF571Q7Z3V5 609 aaPredicted RBP15.25■□□□□ 0.03
SGCE-202ENST00000415788 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 NUP93Q8N1F7 819 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 ZNF512Q96ME7 567 aaPredicted RBP15.25■□□□□ 0.03
SGCE-202ENST00000415788 ARHGAP20Q9P2F6 1191 aa15.25■□□□□ 0.03
SGCE-202ENST00000415788 PRRC2BQ5JSZ5 2229 aaKnown RBP15.24■□□□□ 0.03
SGCE-202ENST00000415788 CCDC195A0A1B0GUA6 201 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 HHLA1C9JL84 531 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 RFPL2O75678 378 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 CFHP08603 1231 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 SSTR3P32745 418 aaPredicted RBP15.24■□□□□ 0.03
SGCE-202ENST00000415788 IRAK1P51617 712 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 SLC5A3P53794 718 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 TAF12Q16514 161 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 SPATS2Q86XZ4 545 aaKnown RBP15.24■□□□□ 0.03
SGCE-202ENST00000415788 LEMD2Q8NC56 503 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 MIS12Q9H081 205 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 FBXO44Q9H4M3 255 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 LRRC4Q9HBW1 653 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 SEPT11Q9NVA2 429 aaKnown RBP15.24■□□□□ 0.03
SGCE-202ENST00000415788 UXTQ9UBK9 157 aaPredicted RBP15.24■□□□□ 0.03
SGCE-202ENST00000415788 TRIM10Q9UDY6 481 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 PLXNA3P51805 1871 aa15.24■□□□□ 0.03
SGCE-202ENST00000415788 CDH23Q9H251 3354 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 ENC1O14682 589 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 TNFRSF10BO14763 440 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 TBX10O75333 385 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 RPL34P49207 117 aaKnown RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 NOMO3P69849 1222 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 PDCLQ13371 301 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 RAB41Q5JT25 222 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 SDHAF4Q5VUM1 108 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 ALS2CLQ60I27 953 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 PMF1Q6P1K2 205 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 DNAJB7Q7Z6W7 309 aaPredicted RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 C1orf131Q8NDD1 294 aaKnown RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 TRMT2BQ96GJ1 504 aaKnown RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 MYRFLQ96LU7 910 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 SH3GL2Q99962 352 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 CAPS2Q9BXY5 557 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 SLC4A5Q9BY07 1137 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 CLEC1BQ9P126 229 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 SLC38A8A6NNN8 435 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 EIF3HO15372 352 aaKnown RBP eCLIP15.23■□□□□ 0.03
SGCE-202ENST00000415788 CCL16O15467 120 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 FGF19O95750 216 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 GZMAP12544 262 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 UNGP13051 313 aaPredicted RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 KIF11P52732 1056 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 SKIV2LQ15477 1246 aaKnown RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 CLEC16AQ2KHT3 1053 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 NAA35Q5VZE5 725 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 EP400NLQ6ZTU2 488 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 TMEM110Q86TL2 294 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 GIPC2Q8TF65 315 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 SMG7Q92540 1137 aaKnown RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 ZNF707Q96C28 371 aaPredicted RBP15.23■□□□□ 0.03
SGCE-202ENST00000415788 CCDC42Q96M95 316 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
SGCE-202ENST00000415788 TTLL2Q9BWV7 592 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 PIDD1Q9HB75 910 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 IL37Q9NZH6 218 aa15.23■□□□□ 0.03
SGCE-202ENST00000415788 PTPRDP23468 1912 aa15.22■□□□□ 0.03
SGCE-202ENST00000415788 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms