RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 KCNN4O15554 427 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 RASSF9O75901 435 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 CCDC130P13994 396 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 DARSP14868 501 aaKnown RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 TGM2P21980 687 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 RPA3P35244 121 aaPredicted RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 BCAR1P56945 870 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 MTFR1Q15390 333 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 CA9Q16790 459 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 FAM110CQ1W6H9 321 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 SOWAHAQ2M3V2 549 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 PPP6R3Q5H9R7 873 aaPredicted RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 UNC93AQ86WB7 457 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 TBCBQ99426 244 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 PITPNM3Q9BZ71 974 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 KLK14Q9P0G3 267 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 FETUBQ9UGM5 382 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 UBQLN1Q9UMX0 589 aaKnown RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 UBOX5O94941 541 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 MAP3K6O95382 1288 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 ZBED1O96006 694 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 F2P00734 622 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 PDGFRBP09619 1106 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 KRT4P19013 534 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 IL4RP24394 825 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 ELK3P41970 407 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 MSH2P43246 934 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 SLC18A1P54219 525 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 FBXO47Q5MNV8 452 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 FAM182AQ5T1J6 154 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 CGB2Q6NT52 195 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 ZDHHC17Q8IUH5 632 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 PQLC3Q8N755 202 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 DENND1AQ8TEH3 1009 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 DNAJB3Q8WWF6 145 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 KHSRPQ92945 711 aaKnown RBP eCLIP12.88□□□□□ -0.355e-7■■■□□ 17.7
UBA3-203ENST00000415609 LENG1Q96BZ8 264 aaPredicted RBP12.88□□□□□ -0.35
UBA3-203ENST00000415609 PLCD4Q9BRC7 762 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 RAB6BQ9NRW1 208 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 SLC5A4Q9NY91 659 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 PAK5Q9P286 719 aa12.88□□□□□ -0.35
UBA3-203ENST00000415609 SLC15A5A6NIM6 579 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 A6NJR5 290 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 GABBR2O75899 941 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 LCP1P13796 627 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 TSHRP16473 764 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 TFE3P19532 575 aaPredicted RBP12.87□□□□□ -0.35
UBA3-203ENST00000415609 HDAC4P56524 1084 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 BST2Q10589 180 aaKnown RBP12.87□□□□□ -0.35
UBA3-203ENST00000415609 DNAJC3Q13217 504 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 XRCC4Q13426 336 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 MFSD10Q14728 455 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 HHATQ5VTY9 493 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 PCDH19Q8TAB3 1148 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 CLEC4CQ8WTT0 213 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 STK32AQ8WU08 396 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 USP6NLQ92738 828 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 GRAMD1AQ96CP6 724 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 ZNF560Q96MR9 790 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 KLHL14Q9P2G3 628 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 GJD2Q9UKL4 321 aa12.87□□□□□ -0.35
UBA3-203ENST00000415609 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 MDM4O15151 490 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 CHADO15335 359 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 TYROBPO43914 113 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 CD4P01730 458 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 RBL1P28749 1068 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 BCAT1P54687 386 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 YWHAGP61981 247 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBA3-203ENST00000415609 PCBP1Q15365 356 aaKnown RBP eCLIP12.86□□□□□ -0.35
UBA3-203ENST00000415609 SLC1A5Q15758 541 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 SLC9A4Q6AI14 798 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 ADGRD1Q6QNK2 874 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 ALKAL1Q6UXT8 129 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 TLK2Q86UE8 772 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 IGDCC3Q8IVU1 814 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 LRRC8CQ8TDW0 803 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 CYTH2Q99418 400 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 PTPN18Q99952 460 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 ZNF670Q9BS34 389 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 DHRS4Q9BTZ2 278 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 USP29Q9HBJ7 922 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 PRKAG3Q9UGI9 489 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 GRID1Q9ULK0 1009 aa12.86□□□□□ -0.35
UBA3-203ENST00000415609 SMIM28A0A1B0GU29 152 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms