RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 BCLAF3A2AJT9 711 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 PHACTR2O75167 634 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 RPN1P04843 607 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 MPLP40238 635 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 AP3M2P53677 418 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 DPYDQ12882 1025 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 NR1H3Q13133 447 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 BIRC3Q13489 604 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 LY6G5CQ5SRR4 150 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 ALLCQ8N6M5 410 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 SLC2A14Q8TDB8 520 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 PNKPQ96T60 521 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 DUSP9Q99956 384 aaKnown RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 KLF16Q9BXK1 252 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 NMUR1Q9HB89 426 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.39e-29■■■■■ 531
NCKIPSD-203ENST00000415281 MBD1Q9UIS9 605 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 PCDHGA5Q9Y5G8 931 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 SPEGQ15772 3267 aa13.17□□□□□ -0.3
NCKIPSD-203ENST00000415281 TPRP12270 2363 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 PATE3B3GLJ2 98 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 IKBKBO14920 756 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 AP1G2O75843 785 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 RHOBTB3O94955 611 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 RTN3O95197 1032 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 KAT7O95251 611 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 HLA-DRAP01903 254 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 EIF2DP41214 584 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 PDE6CP51160 858 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 DGKEP52429 567 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 MAP3K7CLP57077 242 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 MRPS21P82921 87 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 NFIL3Q16649 462 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 ZCWPW2Q504Y3 356 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 HECTD3Q5T447 861 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 N4BP2L1Q5TBK1 243 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 CLEC20AQ6ZU45 233 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 GOLGA5Q8TBA6 731 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 TAS1R2Q8TE23 839 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 FBXO32Q969P5 355 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 SLITRK1Q96PX8 696 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 COMMD8Q9NX08 183 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 AKAP13Q12802 2813 aa13.16□□□□□ -0.3
NCKIPSD-203ENST00000415281 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 CDX4O14627 284 aaPredicted RBP13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 MAPK13O15264 365 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 KRT37O76014 449 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TIE1P35590 1138 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TUBP50607 506 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 INCA1Q0VD86 236 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 HTR3DQ70Z44 454 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 NAT16Q8N8M0 369 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TXNDC5Q8NBS9 432 aaKnown RBP13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 PDZD8Q8NEN9 1154 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 RLN3Q8WXF3 142 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TAF4BQ92750 862 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 SEMA4DQ92854 862 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 ACDQ96AP0 544 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 HNRNPABQ99729 332 aaKnown RBP13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 LSM14BQ9BX40 385 aaKnown RBP13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 VPS45Q9NRW7 570 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 MAPK8IP1Q9UQF2 711 aa13.15□□□□□ -0.3
NCKIPSD-203ENST00000415281 ADAMTS9Q9P2N4 1935 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 SLC9A3R1O14745 358 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 ZZEF1O43149 2961 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 TULP3O75386 442 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 KLF8O95600 359 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 ADH5P11766 374 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 PMLP29590 882 aa13.14□□□□□ -0.31
NCKIPSD-203ENST00000415281 P2RY2P41231 377 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms