RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 SAMD11Q96NU1 681 aa10.15□□□□□ -0.78
RIF1-202ENST00000414861 SSX2IPQ9Y2D8 614 aa10.15□□□□□ -0.78
RIF1-202ENST00000414861 JRKLQ9Y4A0 524 aa10.15□□□□□ -0.78
RIF1-202ENST00000414861 ANAPC1Q9H1A4 1944 aa10.15□□□□□ -0.79
RIF1-202ENST00000414861 OBSL1O75147 1896 aa10.15□□□□□ -0.79
RIF1-202ENST00000414861 HSF2BPO75031 334 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 ADH1AP07327 375 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 PDGFRAP16234 1089 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 TAS2R40P59535 323 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 AMPD2Q01433 879 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 CCDC14Q49A88 953 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 OTUD1Q5VV17 481 aaPredicted RBP10.14□□□□□ -0.79
RIF1-202ENST00000414861 DENND5BQ6ZUT9 1274 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SYCE1Q8N0S2 351 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 KIF18AQ8NI77 898 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 CD101Q93033 1021 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SPATA17Q96L03 361 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 CALCOCO1Q9P1Z2 691 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 IP6K2Q9UHH9 426 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SPOPO43791 374 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 DAB1O75553 588 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 LTFP02788 710 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 GPD1P21695 349 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 ZNF143P52747 638 aaPredicted RBP10.14□□□□□ -0.79
RIF1-202ENST00000414861 RPL10AP62906 217 aaKnown RBP10.14□□□□□ -0.79
RIF1-202ENST00000414861 YWHAZP63104 245 aaKnown RBP10.14□□□□□ -0.79
RIF1-202ENST00000414861 ATP11AP98196 1134 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 CDO1Q16878 200 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 EFHC1Q5JVL4 640 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SYPL2Q5VXT5 272 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 LILRA6Q6PI73 481 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SCD5Q86SK9 330 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 TCEAL8Q8IYN2 117 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 DEFB106AQ8N104 65 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SCML4Q8N228 414 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 NIPA2Q8N8Q9 360 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 MICAL1Q8TDZ2 1067 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 ALG3Q92685 438 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 HES6Q96HZ4 224 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 CALR3Q96L12 384 aaKnown RBP10.14□□□□□ -0.79
RIF1-202ENST00000414861 SLC2A13Q96QE2 648 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SLC28A3Q9HAS3 691 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 NMUR1Q9HB89 426 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 IL37Q9NZH6 218 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 GMIPQ9P107 970 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 FBXW11Q9UKB1 542 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 NAALADL1Q9UQQ1 740 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 INSL5Q9Y5Q6 135 aa10.14□□□□□ -0.79
RIF1-202ENST00000414861 SLC38A8A6NNN8 435 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 DPYSL4O14531 572 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 PRRG1O14668 218 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 SRGAP2O75044 1071 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 LRCH4O75427 683 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 TUBB4AP04350 444 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 KLRC2P26717 231 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 CXCR5P32302 372 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 MAN1A1P33908 653 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 TWF1Q12792 350 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 DCAF12L1Q5VU92 463 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 ADGRD2Q7Z7M1 963 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 EDEM1Q92611 657 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 TIFAQ96CG3 184 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 POPDC2Q9HBU9 364 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 NGRNQ9NPE2 291 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 OSER1Q9NX31 292 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 AMFRQ9UKV5 643 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 SCML2Q9UQR0 700 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 PRRC2BQ5JSZ5 2229 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 DENND4CQ5VZ89 1909 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 A0A1W2PQH9 124 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 FAM92AA1XBS5 289 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 RFXAPO00287 272 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 SART1O43290 800 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 GLI1P08151 1106 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 SDC4P31431 198 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 MATKP42679 507 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 CLCN4P51793 760 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 ATXN1P54253 815 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 PIGHQ14442 188 aaPredicted RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 DCAF6Q58WW2 860 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 BSPRYQ5W0U4 402 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 PAPD7Q5XG87 772 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 TXNRD3NBQ6F5E7 133 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 ARCQ7LC44 396 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 COG1Q8WTW3 980 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 IRGQQ8WZA9 623 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 CNPY3Q9BT09 278 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 DDX23Q9BUQ8 820 aaKnown RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 ASNSD1Q9NWL6 643 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.13□□□□□ -0.792e-7■□□□□ 9.4
RIF1-202ENST00000414861 SNX12Q9UMY4 172 aa10.13□□□□□ -0.79
RIF1-202ENST00000414861 MAGED2Q9UNF1 606 aaPredicted RBP10.13□□□□□ -0.79
RIF1-202ENST00000414861 EYSQ5T1H1 3165 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms