RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 UTP11Q9Y3A2 253 aaKnown RBP11.82□□□□□ -0.52
LINC00330-201ENST00000414562 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 PI4K2BG5E9Z4 385 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 GRM6O15303 877 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 LILRB3O75022 631 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 GRAP2O75791 330 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CSPG5O95196 566 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 MYBL2P10244 700 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 RARAP10276 462 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 RALAP11233 206 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 LCP1P13796 627 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 TCF4P15884 667 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 PDGFRAP16234 1089 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 DESP17661 470 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 TYMPP19971 482 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 GPD1P21695 349 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 TNFRSF8P28908 595 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 ACADSBP45954 432 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SLC6A3Q01959 620 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 DHX34Q14147 1143 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 HLTFQ14527 1009 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 ATP13A4Q4VNC1 1196 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 OVOS1Q6IE37 1185 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 TMEM110Q86TL2 294 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SPPL3Q8TCT6 385 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CASKIN2Q8WXE0 1202 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 RUNDC3BQ96NL0 473 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 HNRNPABQ99729 332 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SYT15Q9BQS2 421 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 FUT8Q9BYC5 575 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 RAB17Q9H0T7 212 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 MTIF3Q9H2K0 278 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 ZWILCHQ9H900 591 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 PCDHA11Q9Y5I1 949 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 RFXAPO00287 272 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 C2CD2LO14523 706 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 BEST1O76090 585 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 KRT7P08729 469 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 PAX3P23760 479 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 PCSK1P29120 753 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CTNNB1P35222 781 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 IRS1P35568 1242 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CARSP49589 748 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 ACAP1Q15027 740 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CCDC137Q6PK04 289 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 DDX53Q86TM3 631 aaKnown RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 ZDHHC17Q8IUH5 632 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CCDC105Q8IYK2 499 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 FUKQ8N0W3 1084 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 TTC9BQ8N6N2 239 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 C1orf54Q8WWF1 131 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 RXFP2Q8WXD0 754 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 GDAP1L1Q96MZ0 367 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 CNPY3Q9BT09 278 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 B3GNT5Q9BYG0 378 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 OSBPL8Q9BZF1 889 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 NFU1Q9UMS0 254 aa11.81□□□□□ -0.52
LINC00330-201ENST00000414562 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
LINC00330-201ENST00000414562 SF3B1O75533 1304 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 C5orf42Q9H799 3197 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 ARHGEF37A1IGU5 675 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 LRRD1A4D1F6 860 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 FAM187AA6NFU0 413 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 SOD2P04179 222 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 DNAJB2P25686 324 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 ZNF143P52747 638 aaPredicted RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 MLLT1Q03111 559 aaPredicted RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 CUL1Q13616 776 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 FAM171BQ6P995 826 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 POLNQ7Z5Q5 900 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 AENQ8WTP8 325 aaKnown RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 RIN2Q8WYP3 895 aaPredicted RBP11.8□□□□□ -0.52
LINC00330-201ENST00000414562 HSFY1Q96LI6 401 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 CLSTN3Q9BQT9 956 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 TRIM51Q9BSJ1 452 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 TTPALQ9BTX7 342 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 DUSP16Q9BY84 665 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 OGFRQ9NZT2 677 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 PCSK1NQ9UHG2 260 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 DSEQ9UL01 958 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 CDH9Q9ULB4 789 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 XIRP2A4UGR9 3374 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 DOCK6Q96HP0 2047 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 PRUNE2Q8WUY3 3088 aa11.8□□□□□ -0.52
LINC00330-201ENST00000414562 C2CD4BA6NLJ0 364 aa11.79□□□□□ -0.52
LINC00330-201ENST00000414562 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
LINC00330-201ENST00000414562 SYN3O14994 580 aa11.79□□□□□ -0.52
LINC00330-201ENST00000414562 PAPSS1O43252 624 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms