RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DDX18Q9NVP1 670 aaKnown RBP9.82□□□□□ -0.84
SNHG3-201ENST00000413987 TELO2Q9Y4R8 837 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 NFS1Q9Y697 457 aa9.82□□□□□ -0.84
SNHG3-201ENST00000413987 SSU72P8A0A1W2PR75 194 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 TRIM49BA6NDI0 452 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ATP2A1O14983 1001 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 DDHD2O94830 711 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 PAPLNO95428 1278 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ADRB2P07550 413 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 PDHA1P08559 390 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ALADP13716 330 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 STAT6P42226 847 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ATP5OP48047 213 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 PRIM2P49643 509 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 OAZ1P54368 228 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 EIF3BP55884 814 aaKnown RBP9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ERVK-9P63128 1117 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF844Q08AG5 666 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 RGMBQ6NW40 437 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 PTRH1Q86Y79 214 aaKnown RBP9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ETFBKMTQ8IXQ9 262 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 OR8H3Q8N146 312 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 MOSPD2Q8NHP6 518 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 FATE1Q969F0 183 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 PSMB7Q99436 277 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 RNF38Q9H0F5 515 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 KCNMB3Q9NPA1 279 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 SMARCAL1Q9NZC9 954 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 ARHGAP20Q9P2F6 1191 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 MTUS1Q9ULD2 1270 aa9.81□□□□□ -0.84
SNHG3-201ENST00000413987 APOBEC2Q9Y235 224 aaKnown RBP9.81□□□□□ -0.84
SNHG3-201ENST00000413987 MKI67P46013 3256 aaKnown RBP9.81□□□□□ -0.84
SNHG3-201ENST00000413987 F5H0A9 414 aaPredicted RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ATP2C2O75185 946 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 EPN2O95208 641 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 F12P00748 615 aaPredicted RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 PLATP00750 562 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 FESP07332 822 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ZBTB48P10074 688 aaPredicted RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CKMT1AP12532 417 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CCNE1P24864 410 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 GNL1P36915 607 aaPredicted RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 RPIAP49247 311 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 TKTL1P51854 596 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ERVK-21P61565 698 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ADAM15Q13444 863 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 TAF5Q15542 800 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CEP55Q53EZ4 464 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ERMARDQ5T6L9 678 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 RIOX2Q8IUF8 465 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF784Q8NCA9 323 aaPredicted RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 SMC1BQ8NDV3 1235 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 FBXO27Q8NI29 283 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM237Q96Q45 408 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 PDCD2LQ9BRP1 358 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ARHGAP39Q9C0H5 1083 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 NDST4Q9H3R1 872 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 POLD4Q9HCU8 107 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CPA4Q9UI42 421 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 PCDHA12Q9UN75 941 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 MYPNQ86TC9 1320 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 RPTORQ8N122 1335 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CYP3A7-CYP3A51PA0A087WV96 503 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 K7ESF4 209 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 NCK2O43639 380 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ATP9AO75110 1047 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 SLC22A3O75751 556 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ENDOD1O94919 500 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CLTAP09496 248 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 TMEM11P17152 192 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 PLCG1P19174 1290 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 FGFR4P22455 802 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CYP3A7P24462 503 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 YY1P25490 414 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CAMK2GQ13555 558 aaPredicted RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 SEMA5AQ13591 1074 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ZNF460Q14592 562 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 GEN1Q17RS7 908 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ARL13BQ3SXY8 428 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 KCNK18Q7Z418 384 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CABP7Q86V35 215 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 UNC45BQ8IWX7 931 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 KIRREL3Q8IZU9 778 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ZBTB34Q8NCN2 500 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ZMIZ2Q8NF64 920 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 TOR1AIP2Q8NFQ8 470 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 P2RX5Q93086 422 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 VPS39Q96JC1 886 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 MBOAT7Q96N66 472 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 XPO6Q96QU8 1125 aaKnown RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 YME1L1Q96TA2 773 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 ACO2Q99798 780 aaKnown RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 FAM129AQ9BZQ8 928 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 NSRP1Q9H0G5 558 aaKnown RBP9.8□□□□□ -0.84
SNHG3-201ENST00000413987 CERS4Q9HA82 394 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 MAGEF1Q9HAY2 307 aa9.8□□□□□ -0.84
SNHG3-201ENST00000413987 EHD2Q9NZN4 543 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms