RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 KCNT1Q5JUK3 1230 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 UNC93AQ86WB7 457 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 ARL8AQ96BM9 186 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 SPATA17Q96L03 361 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 FTHL17Q9BXU8 183 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
PHRF1-202ENST00000413872 TRPC5OSA6NMA1 111 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 SYNCRIPO60506 623 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 TAGAPQ8N103 731 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 TATDN2Q93075 761 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 BHMTQ93088 406 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 E2F7Q96AV8 911 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 CMTM5Q96DZ9 223 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 SMARCAL1Q9NZC9 954 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 TNFSF13BQ9Y275 285 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 USP15Q9Y4E8 981 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 SLIT3O75094 1523 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 PPP3CCP48454 512 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 REXO1L1PQ8IX06 675 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 FAR2Q96K12 515 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 SRPK1Q96SB4 655 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 WWOXQ9NZC7 414 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 FRMD3A2A2Y4 597 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 TRIM49D1C9J1S8 452 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 H0Y3Z8 333 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 TRIM66O15016 1216 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 EIF4BP23588 611 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 ALDH18A1P54886 795 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 FOXD4Q12950 439 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 CCDC60Q8IWA6 550 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 ADAM2Q99965 735 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 PABPC3Q9H361 631 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 AVENQ9NQS1 362 aaPredicted RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 TMCO4Q5TGY1 634 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 C16orf89Q6UX73 402 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 EIF2AQ9BY44 585 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 GID8Q9NWU2 228 aa17.86■□□□□ 0.45
PHRF1-202ENST00000413872 FAM32AQ9Y421 112 aaKnown RBP17.86■□□□□ 0.45
PHRF1-202ENST00000413872 CDH2P19022 906 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-202ENST00000413872 DNAJB2P25686 324 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 PGM1P36871 562 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 C1orf186Q6ZWK4 172 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 FAM9CQ8IZT9 166 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 SLC20A1Q8WUM9 679 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 DCDC2Q9UHG0 476 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 TMEM120BA0PK00 339 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 MAGEB16A2A368 324 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 EIF3HO15372 352 aaKnown RBP eCLIP17.85■□□□□ 0.451e-7■■□□□ 12.8
PHRF1-202ENST00000413872 FKTNO75072 461 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 ALDH1A2O94788 518 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 MAGEA9P43362 315 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 SERPINB8P50452 374 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 CREMQ03060 361 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 PABPC1LQ4VXU2 614 aaKnown RBP17.85■□□□□ 0.45
PHRF1-202ENST00000413872 TATDN1Q6P1N9 297 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 GPR142Q7Z601 462 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 CLPBQ9H078 707 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 EEF1DP29692 281 aaKnown RBP17.85■□□□□ 0.45
PHRF1-202ENST00000413872 SLC29A2Q14542 456 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 APBB2Q92870 758 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 SYTL2Q9HCH5 934 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 SNCAIPQ9Y6H5 919 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 ANKRD65E5RJM6 399 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 STARD3Q14849 445 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 MROH9Q5TGP6 573 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 MARC1Q5VT66 337 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 PAPD7Q5XG87 772 aaKnown RBP17.85■□□□□ 0.45
PHRF1-202ENST00000413872 HNRNPLLQ8WVV9 542 aaKnown RBP17.85■□□□□ 0.45
PHRF1-202ENST00000413872 CEP19Q96LK0 163 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 GPATCH2LQ9NWQ4 482 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 ARHGAP20Q9P2F6 1191 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 RECQL4O94761 1208 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 JCHAINP01591 159 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 TSPAN18Q96SJ8 248 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 NEUROG2Q9H2A3 272 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 ANLNQ9NQW6 1124 aa17.85■□□□□ 0.45
PHRF1-202ENST00000413872 GOLGA8TH3BQL2 631 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 MEIS2O14770 477 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 RAMP2O60895 175 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 SERPINF2P08697 491 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 CYP2F1P24903 491 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 ADIGQ0VDE8 80 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 LVRNQ6Q4G3 990 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 POTEAQ6S8J7 498 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 DDX42Q86XP3 938 aaKnown RBP eCLIP17.84■□□□□ 0.45
PHRF1-202ENST00000413872 CIPCQ9C0C6 399 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 MAFO75444 373 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-202ENST00000413872 BEX3Q00994 111 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 MED21Q13503 144 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 GRIK5Q16478 980 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 NLRP9Q7RTR0 991 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 EMC1Q8N766 993 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-202ENST00000413872 MRPS6P82932 125 aaKnown RBP17.84■□□□□ 0.45
PHRF1-202ENST00000413872 NPHS2Q9NP85 383 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 RARGP13631 454 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 NR2C2P49116 596 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 C2CD6Q53TS8 623 aa17.84■□□□□ 0.45
PHRF1-202ENST00000413872 FAXCQ5TGI0 409 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms