RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CASKIN2Q8WXE0 1202 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CPA5Q8WXQ8 436 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 SEC14L1Q92503 715 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CPB2Q96IY4 423 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 RUNDC3BQ96NL0 473 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 DDX47Q9H0S4 455 aaKnown RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 EPB41L5Q9HCM4 733 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 FBXO4Q9UKT5 387 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 ITGA11Q9UKX5 1188 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 DERAQ9Y315 318 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 MTF2Q9Y483 593 aaPredicted RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 PCDHGA2Q9Y5H1 932 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 SPEGQ15772 3267 aa18.01■□□□□ 0.47
PTPRC-206ENST00000413409 CNOT1A5YKK6 2376 aaKnown RBP18.01■□□□□ 0.47
PTPRC-206ENST00000413409 FAM187AA6NFU0 413 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 H3BQF6 201 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 LILRB3O75022 631 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 LILRB5O75023 590 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 PHF2O75151 1096 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 PROSCO94903 275 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 ITGA4P13612 1032 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 P4HA1P13674 534 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 MMP8P22894 467 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 KLRC2P26717 231 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 MARCKSL1P49006 195 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 DHX34Q14147 1143 aaKnown RBP18■□□□□ 0.47
PTPRC-206ENST00000413409 TTC39CQ8N584 583 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 TMEM35BQ8NCS4 154 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 C11orf70Q9BRQ4 267 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 SLC2A4RGQ9NR83 387 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 SPATA6Q9NWH7 488 aaPredicted RBP18■□□□□ 0.47
PTPRC-206ENST00000413409 CEP83Q9Y592 693 aa18■□□□□ 0.47
PTPRC-206ENST00000413409 A0A0U1RQF3 1178 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 MYO1FO00160 1098 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 LAMTOR5O43504 91 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 MED7O43513 233 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 PSTPIP1O43586 416 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 GALTP07902 379 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CD58P19256 250 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CARSP49589 748 aaKnown RBP17.99■□□□□ 0.47
PTPRC-206ENST00000413409 MRPS25P82663 173 aaKnown RBP17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CYP1B1Q16678 543 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 SLC10A6Q3KNW5 377 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 GLIPR1L2Q4G1C9 344 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 HSP90B2PQ58FF3 399 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 SCARA3Q6AZY7 606 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 SCARA5Q6ZMJ2 495 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 PASD1Q8IV76 773 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CMASQ8NFW8 434 aaPredicted RBP17.99■□□□□ 0.47
PTPRC-206ENST00000413409 NELL1Q92832 810 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 NXPE3Q969Y0 559 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 BTBD6Q96KE9 485 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 ACAP3Q96P50 834 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 RAB17Q9H0T7 212 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 PLEKHA5Q9HAU0 1116 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 PARVAQ9NVD7 372 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CHORDC1Q9UHD1 332 aaPredicted RBP17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CLUHO75153 1309 aa17.99■□□□□ 0.47
PTPRC-206ENST00000413409 CCDC195A0A1B0GUA6 201 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 FAM170AA1A519 330 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ANHXE9PGG2 379 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 B4GALT3O60512 393 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 EIF4BP23588 611 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 BRD2P25440 801 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 AXLP30530 894 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 CHRNA3P32297 505 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ZNF211Q13398 564 aaPredicted RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 MMS22LQ6ZRQ5 1243 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 SLC13A5Q86YT5 568 aaPredicted RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 C12orf50Q8NA57 414 aaPredicted RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 MAIP1Q8WWC4 291 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 RPP25Q9BUL9 199 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 MRPL9Q9BYD2 267 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 LHX5Q9H2C1 402 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 NRDE2Q9H7Z3 1164 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ST7Q9NRC1 585 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 FAM114A2Q9NRY5 505 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 POLIQ9UNA4 740 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 CITO14578 2027 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 PATJQ8NI35 1801 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ZSCAN5CA6NGD5 496 aaPredicted RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 SLC30A4O14863 429 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ITGB3P05106 788 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 KRT19P08727 400 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 LAMP2P13473 410 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 DARSP14868 501 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 FGFR4P22455 802 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 GSCP56915 257 aaPredicted RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 RBP5P82980 135 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 MAMLD1Q13495 774 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 HTR4Q13639 388 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 NOTUMQ6P988 496 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 SLC27A1Q6PCB7 646 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ZNF707Q96C28 371 aaPredicted RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 DDX23Q9BUQ8 820 aaKnown RBP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 MAN1C1Q9NR34 630 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 ZSCAN32Q9NX65 697 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms