RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 NR1I3Q14994 352 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 ZNF77Q15935 545 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 TRIM68Q6AZZ1 485 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 HFE2Q6ZVN8 426 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 WDTC1Q8N5D0 677 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 C1orf131Q8NDD1 294 aaKnown RBP8.12□□□□□ -1.11
CPSF4-202ENST00000412686 NEK11Q8NG66 645 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 TTC8Q8TAM2 541 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 BPIFB1Q8TDL5 484 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 SLC20A1Q8WUM9 679 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 NXPE3Q969Y0 559 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 ASIC4Q96FT7 647 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 MIS12Q9H081 205 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 FBXO44Q9H4M3 255 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 TRPV4Q9HBA0 871 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 TDP1Q9NUW8 608 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 EHD2Q9NZN4 543 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 IFNKQ9P0W0 207 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 CPQQ9Y646 472 aa8.12□□□□□ -1.11
CPSF4-202ENST00000412686 TECTAO75443 2155 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 KRBA1A5PL33 1030 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 YJEFN3A6XGL0 299 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 E5RJQ4 531 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 E7ENQ6 273 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 LEFTY2O00292 366 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 ARNTLO00327 626 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 DPYSL4O14531 572 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 MED7O43513 233 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TLR5O60602 858 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 CAVIN2O95810 425 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 MMEP08473 750 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 RARGP13631 454 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 ARSAP15289 507 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 PSMC3P17980 439 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 RFX1P22670 979 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SOX5P35711 763 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SOX9P48436 509 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 UBASH3AP57075 661 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SLC8A3P57103 927 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 DAOAP59103 153 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TPM4P67936 248 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 ARID5AQ03989 594 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 PTK2Q05397 1052 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TNK2Q07912 1038 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SIGLEC14Q08ET2 396 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 USP4Q13107 963 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 PDCLQ13371 301 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 MTF1Q14872 753 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 STILQ15468 1287 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 FILIP1LQ4L180 1135 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 HECTD3Q5T447 861 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SNX30Q5VWJ9 437 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 E4F1Q66K89 784 aaPredicted RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 CCDC186Q7Z3E2 898 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 GAS2L3Q86XJ1 694 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 MFSD6LQ8IWD5 586 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 UBALD2Q8IYN6 164 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SIX6OS1Q8N1H7 587 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 CELF5Q8N6W0 485 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 PDZD8Q8NEN9 1154 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SH3RF2Q8TEC5 729 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 DEPDC1BQ8WUY9 529 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 KCTD13Q8WZ19 329 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 OVCA2Q8WZ82 227 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 DDX1Q92499 740 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 BAP1Q92560 729 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 EDEM1Q92611 657 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 PIWIL1Q96J94 861 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 ZFRQ96KR1 1074 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SPAG5Q96R06 1193 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TRMT61BQ9BVS5 477 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 UBXN6Q9BZV1 441 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 BRD9Q9H8M2 597 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 SLC2A4RGQ9NR83 387 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TLR8Q9NR97 1041 aaKnown RBP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 ST7Q9NRC1 585 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 HEBP1Q9NRV9 189 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 GKN1Q9NS71 199 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
CPSF4-202ENST00000412686 COMMD8Q9NX08 183 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 GTSE1Q9NYZ3 720 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 NAGPAQ9UK23 515 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 FBXL21Q9UKT6 434 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 ARHGAP26Q9UNA1 814 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 WNT6Q9Y6F9 365 aa8.11□□□□□ -1.11
CPSF4-202ENST00000412686 TMEM221A6NGB7 291 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-202ENST00000412686 SHISA7A6NL88 538 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 M0R296 226 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 ZNF263O14978 683 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 SNPHO15079 494 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 PAPSS1O43252 624 aaPredicted RBP8.1□□□□□ -1.11
CPSF4-202ENST00000412686 AP5Z1O43299 807 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 ZBED1O96006 694 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 ERBB2P04626 1255 aa8.1□□□□□ -1.11
CPSF4-202ENST00000412686 IRF1P10914 325 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms