RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ARHGAP17Q68EM7 881 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 NOTUMQ6P988 496 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 LVRNQ6Q4G3 990 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 TBC1D1Q86TI0 1168 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 OR6B3Q8NGW1 331 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 RTP4Q96DX8 246 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 RMDN2Q96LZ7 410 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 USP29Q9HBJ7 922 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 FAM49BQ9NUQ9 324 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 CHMP2BQ9UQN3 213 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 IKBKGQ9Y6K9 419 aa11.96□□□□□ -0.49
TRAFD1-202ENST00000412615 BTBD19C9JJ37 291 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 KCNN4O15554 427 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 PAPSS1O43252 624 aaPredicted RBP11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 NCALDP61601 193 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 GPR142Q7Z601 462 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 DCAKDQ8WVC6 231 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 MAML3Q96JK9 1138 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF670Q9BS34 389 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 FAM49AQ9H0Q0 323 aaPredicted RBP11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 HEY1Q9Y5J3 304 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.5
TRAFD1-202ENST00000412615 CCL15-CCL14A0A0B4J2E2 113 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 IQANK1A0A1B0GTG1 560 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 BCLAF3A2AJT9 711 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 A8MXQ7 604 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF487B1APH4 448 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 PPEF2O14830 753 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 TM9SF1O15321 606 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 EDF1O60869 148 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 ZBED1O96006 694 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 GTF2A2P52657 109 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 MGAT5Q09328 741 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 MTM1Q13496 603 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 SETDB1Q15047 1291 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 CCL15Q16663 113 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 SLC9A4Q6AI14 798 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 PQLC3Q8N755 202 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 PCDH19Q8TAB3 1148 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 MAGEC3Q8TD91 643 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 MZB1Q8WU39 189 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 KLHL29Q96CT2 875 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 MS4A4AQ96JQ5 239 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 SNRNP25Q9BV90 132 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 CXCL16Q9H2A7 254 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 GPATCH2LQ9NWQ4 482 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 TUBGCP4Q9UGJ1 667 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 GRID1Q9ULK0 1009 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 USH1CQ9Y6N9 552 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 NQO1P15559 274 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 ALDH3A1P30838 453 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 SKIV2L2P42285 1042 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 GTF2A1P52655 376 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 GRB14Q14449 540 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 IGDCC3Q8IVU1 814 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 C7orf31Q8N865 590 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 SPOCK2Q92563 424 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 EIF2AQ9BY44 585 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 TRIM6Q9C030 488 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 DNAI2Q9GZS0 605 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 KLC2Q9H0B6 622 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 UBQLN1Q9UMX0 589 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 PLXNA1Q9UIW2 1896 aa11.95□□□□□ -0.5
TRAFD1-202ENST00000412615 TCRBV9S1A1TA0A576 114 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 GPR32O75388 356 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CD4P01730 458 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 MT-ND3P03897 115 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 INHBAP08476 426 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 RBL1P28749 1068 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PTPN9P43378 593 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 HDAC4P56524 1084 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 YWHAGP61981 247 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF200P98182 395 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 C9orf57Q5W0N0 161 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ANKRD23Q86SG2 305 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 BANPQ8N9N5 519 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ZNF75CPQ92670 426 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 C18orf25Q96B23 403 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CD248Q9HCU0 757 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SLCO1B3Q9NPD5 702 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 CNTN3Q9P232 1028 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 NME7Q9Y5B8 376 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SMIM35A0A1B0GVV1 85 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 PIAS1O75925 651 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 TOMM70O94826 608 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 ZFXP17010 805 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 AXLP30530 894 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 SCNN1AP37088 669 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 BCAT1P54687 386 aa11.94□□□□□ -0.5
TRAFD1-202ENST00000412615 BST2Q10589 180 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms