RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 PNPLA8Q9NP80 782 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 TJP2Q9UDY2 1190 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 MTF2Q9Y483 593 aaPredicted RBP12.6□□□□□ -0.39
NEDD1-202ENST00000411739 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 ZBED1O96006 694 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 PLA2G4AP47712 749 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 ZNF77Q15935 545 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 FAM71AQ8IYT1 594 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 RNF214Q8ND24 703 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 EDEM1Q92611 657 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 IRF7Q92985 503 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 E2F7Q96AV8 911 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 UBXN6Q9BZV1 441 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 CFAP97Q9P2B7 532 aa12.6□□□□□ -0.39
NEDD1-202ENST00000411739 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 ARNTLO00327 626 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 GFPT2O94808 682 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 SERPINC1P01008 464 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 SETSIPP0DME0 302 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 RFX1P22670 979 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 WEE1P30291 646 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 GPD2P43304 727 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 PTK2Q05397 1052 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 MTF1Q14872 753 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 C10orf120Q5SQS8 335 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 CC2D1AQ6P1N0 951 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 TPRG1Q6ZUI0 275 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 SCUBE3Q8IX30 993 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 SIX6OS1Q8N1H7 587 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 WDTC1Q8N5D0 677 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 FAM81BQ96LP2 452 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 STK33Q9BYT3 514 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 ARHGAP26Q9UNA1 814 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 NUP210Q8TEM1 1887 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 PATJQ8NI35 1801 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 YJEFN3A6XGL0 299 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 E7ENQ6 273 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 F8VZ95 297 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 CHADO15335 359 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 OLFM2O95897 454 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 HMBSP08397 361 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 MLF2Q15773 248 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 SNX30Q5VWJ9 437 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 CWF19L1Q69YN2 538 aaKnown RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 BHLHA9Q7RTU4 235 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 MIB1Q86YT6 1006 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 NEK11Q8NG66 645 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 CSGALNACT1Q8TDX6 532 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 HPS4Q9NQG7 708 aa12.59□□□□□ -0.39
NEDD1-202ENST00000411739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 THG1LQ9NWX6 298 aaKnown RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 DUS2Q9NX74 493 aaKnown RBP12.59□□□□□ -0.39
NEDD1-202ENST00000411739 TICRRQ7Z2Z1 1910 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 SHISA7A6NL88 538 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 MED7O43513 233 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 KPNA1P52294 538 aaPredicted RBP12.58□□□□□ -0.4
NEDD1-202ENST00000411739 YWHAGP61981 247 aaKnown RBP eCLIP12.58□□□□□ -0.4
NEDD1-202ENST00000411739 SLC7A9P82251 487 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 PFKPQ01813 784 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 ARID5AQ03989 594 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 EFEMP1Q12805 493 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 STILQ15468 1287 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.4
NEDD1-202ENST00000411739 FBXL6Q8N531 539 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 FAM83CQ9BQN1 747 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 OBP2AQ9NY56 170 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 ZMYM5Q9UJ78 669 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 PIAS3Q9Y6X2 628 aa12.58□□□□□ -0.4
NEDD1-202ENST00000411739 SOBPA7XYQ1 873 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 GOLGA6L19H0YKK7 550 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 DCNP07585 359 aaKnown RBP12.57□□□□□ -0.4
NEDD1-202ENST00000411739 CYP11B1P15538 503 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 KRT9P35527 623 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 ATP5C1P36542 298 aaKnown RBP12.57□□□□□ -0.4
NEDD1-202ENST00000411739 FANCCQ00597 558 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 USP4Q13107 963 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 ZNF268Q14587 947 aaPredicted RBP12.57□□□□□ -0.4
NEDD1-202ENST00000411739 UBXN2BQ14CS0 331 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 PM20D1Q6GTS8 502 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
NEDD1-202ENST00000411739 C1orf131Q8NDD1 294 aaKnown RBP12.57□□□□□ -0.4
NEDD1-202ENST00000411739 SLC20A1Q8WUM9 679 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 KCTD13Q8WZ19 329 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 KIF9Q9HAQ2 790 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 NDRG2Q9UN36 371 aaKnown RBP12.57□□□□□ -0.4
NEDD1-202ENST00000411739 F5P12259 2224 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 WDFY4Q6ZS81 3184 aa12.57□□□□□ -0.4
NEDD1-202ENST00000411739 E5RJQ4 531 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms