RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 VRTNQ9H8Y1 702 aa12.49□□□□□ -0.41
SERF2-210ENST00000409960 DMAP1Q9NPF5 467 aaPredicted RBP12.49□□□□□ -0.41
SERF2-210ENST00000409960 DEC1Q9P2X7 70 aa12.49□□□□□ -0.41
SERF2-210ENST00000409960 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
SERF2-210ENST00000409960 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
SERF2-210ENST00000409960 TNRC6BQ9UPQ9 1833 aaKnown RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 GON4LQ3T8J9 2241 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 TBC1D3BA6NDS4 549 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 GIPC1O14908 333 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 SPTLC2O15270 562 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 HOXC11O43248 304 aaPredicted RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 TGFB1I1O43294 461 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 COCHO43405 550 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 P4HA1P13674 534 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 RDXP35241 583 aaKnown RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 HOXD13P35453 343 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 SLC6A11P48066 632 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 CYP2J2P51589 502 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 UAP1L1Q3KQV9 507 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 SLC36A4Q6YBV0 504 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 UNC13DQ70J99 1090 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 PGBD3Q8N328 593 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 KDF1Q8NAX2 398 aaPredicted RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 GLIS3Q8NEA6 775 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 HMGB4Q8WW32 186 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 SMARCD1Q96GM5 515 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 C7orf25Q9BPX7 421 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 B3GNT5Q9BYG0 378 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 NACA2Q9H009 215 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
SERF2-210ENST00000409960 MTMR6Q9Y217 621 aa12.48□□□□□ -0.41
SERF2-210ENST00000409960 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 TCRBV21S2A2A0A5A6 115 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 FAM92AA1XBS5 289 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 UPK3BL1B0FP48 263 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 UPK3BL2E5RIL1 263 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 STX6O43752 255 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 EXOC3O60645 756 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 CUTAO60888 179 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 ZNF217O75362 1048 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 CLSTN1O94985 981 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 YEATS4O95619 227 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 PDIA4P13667 645 aaKnown RBP12.47□□□□□ -0.41
SERF2-210ENST00000409960 SLC5A3P53794 718 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 ATXN3P54252 364 aaPredicted RBP12.47□□□□□ -0.41
SERF2-210ENST00000409960 CACNA2D1P54289 1103 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 MYL6P60660 151 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 KDSRQ06136 332 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 GOLGA8FQ08AF8 430 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 GOLGA8DPQ0D2H9 430 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 DUOXA1Q1HG43 343 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 BMT2Q1RMZ1 405 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 ZNF699Q32M78 642 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 MAP7D1Q3KQU3 841 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 PEAR1Q5VY43 1037 aaPredicted RBP12.47□□□□□ -0.41
SERF2-210ENST00000409960 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 C12orf40Q86WS4 652 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 ETFBKMTQ8IXQ9 262 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 TMEFF1Q8IYR6 380 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 PHTF2Q8N3S3 785 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 TERB1Q8NA31 727 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 SCFD1Q8WVM8 642 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 DHX58Q96C10 678 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
SERF2-210ENST00000409960 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 XYLT2Q9H1B5 865 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 FBXO44Q9H4M3 255 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 SPHK2Q9NRA0 654 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 TMEM30AQ9NV96 361 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 IL37Q9NZH6 218 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 WASF3Q9UPY6 502 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 NME7Q9Y5B8 376 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 PCNX2A6NKB5 2137 aa12.47□□□□□ -0.41
SERF2-210ENST00000409960 IGF2RP11717 2491 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 PVALEFA0A1B0GWK0 134 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 CLDN5O00501 218 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 CLIC2O15247 247 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 ADAM23O75077 832 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 TULP3O75386 442 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.41
SERF2-210ENST00000409960 ZDHHC11BP0C7U3 371 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 C1QTNF9P0C862 333 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.41
SERF2-210ENST00000409960 ENGP17813 658 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 NTSR1P30989 418 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 PTGER3P43115 390 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 GFPT1Q06210 699 aaPredicted RBP12.46□□□□□ -0.41
SERF2-210ENST00000409960 EHHADHQ08426 723 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 BIRC3Q13489 604 aa12.46□□□□□ -0.41
SERF2-210ENST00000409960 HNRNPDQ14103 355 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms