RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 LRRC8EQ6NSJ5 796 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 ATXN3LQ9H3M9 355 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 FAM96AQ9H5X1 160 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 CST3P01034 146 aaPredicted RBP17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 PNPLA4P41247 253 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 GTF2A2P52657 109 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 FAAP100Q0VG06 881 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 CHSY1Q86X52 802 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 LENG9Q96B70 501 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 IL1RL2Q9HB29 575 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 KIAA1257Q9ULG3 409 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 SDR42E2A6NKP2 422 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 CBX6O95503 412 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 CPT1AP50416 773 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 PTK6Q13882 451 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 C10orf120Q5SQS8 335 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 NCLNQ969V3 563 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 TSC22D3Q99576 134 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 PPCSQ9HAB8 311 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 CHST12Q9NRB3 414 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 ARMCX1Q9P291 453 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 SNED1Q8TER0 1413 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 FANCGO15287 622 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 ENDOD1O94919 500 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 MCF2P10911 925 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 KATNAL2Q8IYT4 538 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 DEFB106AQ8N104 65 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 ULK4Q96C45 1275 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 MRPL46Q9H2W6 279 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 CYP4F12Q9HCS2 524 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 SPATS2LQ9NUQ6 558 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 DDX43Q9NXZ2 648 aaKnown RBP17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 AURKCQ9UQB9 309 aa17.06■□□□□ 0.32
PTPRN2-205ENST00000409483 SPATA31C2B4DYI2 1134 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 OPLAHO14841 1288 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 RECQL4O94761 1208 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 EIF4BP23588 611 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 KDELR1P24390 212 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 ZNF268Q14587 947 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 KCNT2Q6UVM3 1135 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 IARS2Q9NSE4 1012 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 ZBBXA8MT70 800 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 ST13P4Q8IZP2 240 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 USP6NLQ92738 828 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 ASIC4Q96FT7 647 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 SLITRK1Q96PX8 696 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 RASSF10A6NK89 507 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 HSPA8P11142 646 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 BST2Q10589 180 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 TRIP10Q15642 601 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 GPC2Q8N158 579 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 PCYOX1Q9UHG3 505 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 FAF1Q9UNN5 650 aaPredicted RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 SMAPO00193 183 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 EGFRP00533 1210 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 ITIH4Q14624 930 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 CELF3Q5SZQ8 465 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 ERMARDQ5T6L9 678 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 CAPRIN2Q6IMN6 1127 aaKnown RBP17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 TMEM120AQ9BXJ8 343 aa17.05■□□□□ 0.32
PTPRN2-205ENST00000409483 KCNA4P22459 653 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 RPA3P35244 121 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 KBTBD12Q3ZCT8 623 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 ICA1LQ8NDH6 482 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 JOSD2Q8TAC2 188 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 DNAJC16Q9Y2G8 782 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 WDR27A2RRH5 827 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 BTNL10A8MVZ5 291 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 DDX3YO15523 660 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 THP07101 528 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 CCND1P24385 295 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 TWF1Q12792 350 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 RCN1Q15293 331 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 STRA8Q7Z7C7 330 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 NUP93Q8N1F7 819 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 LRRC57Q8N9N7 239 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 BLOC1S5Q8TDH9 187 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 RPRD1AQ96P16 312 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 ACO2Q99798 780 aaKnown RBP17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 ASB7Q9H672 318 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 GBA2Q9HCG7 927 aaPredicted RBP17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 ITGA11Q9UKX5 1188 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 CXCL11O14625 94 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 ATICP31939 592 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 DAW1Q8N136 415 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 SLC27A1Q6PCB7 646 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 RFWD2Q8NHY2 731 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 HELQQ8TDG4 1101 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 CLEC4DQ8WXI8 215 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 CCDC138Q96M89 665 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 SLCO1B3Q9NPD5 702 aa17.04■□□□□ 0.32
PTPRN2-205ENST00000409483 POU6F1Q14863 301 aa17.03■□□□□ 0.32
PTPRN2-205ENST00000409483 ZC3H12AQ5D1E8 599 aaKnown RBP17.03■□□□□ 0.32
PTPRN2-205ENST00000409483 NAPEPLDQ6IQ20 393 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms