RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NUP210Q8TEM1 1887 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 TLR5O60602 858 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 CYP11B1P15538 503 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 TCF3P15923 654 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 RPL34P49207 117 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 RGS7P49802 495 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 FANCCQ00597 558 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 PLCB2Q00722 1185 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 NR1I3Q14994 352 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 ARHGAP29Q52LW3 1261 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 TMEM31Q5JXX7 168 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 SCML4Q8N228 414 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 ZNF276Q8N554 614 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 SH3RF2Q8TEC5 729 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 DNASE1L2Q92874 299 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 SPAG5Q96R06 1193 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 ULBP1Q9BZM6 244 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 CNGB3Q9NQW8 809 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 NAGPAQ9UK23 515 aa20.87■□□□□ 0.93
PDLIM2-207ENST00000409417 A0A1W2PQC6 194 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 FAM86C2PA6NEL3 165 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 ARNTLO00327 626 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 GABBR2O75899 941 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 KRT9P35527 623 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 ZNF445P59923 1031 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 ZXDBP98169 803 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 ZNF77Q15935 545 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 KLHDC10Q6PID8 442 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 SIX5Q8N196 739 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 RIN3Q8TB24 985 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 NACA2Q9H009 215 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 LHX5Q9H2C1 402 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 CPQQ9Y646 472 aa20.86■□□□□ 0.93
PDLIM2-207ENST00000409417 MBL2P11226 248 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 RARGP13631 454 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 LCP1P13796 627 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 SOX5P35711 763 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 STAT1P42224 750 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 ACADSBP45954 432 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 USP4Q13107 963 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 CC2D1AQ6P1N0 951 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 BMP8AQ7Z5Y6 402 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 CDK5RAP1Q96SZ6 601 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 SLC4A5Q9BY07 1137 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 ARHGEF3Q9NR81 526 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 ST7Q9NRC1 585 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 SMPD4Q9NXE4 827 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 F5P12259 2224 aa20.85■□□□□ 0.93
PDLIM2-207ENST00000409417 PRR33A8MZF0 331 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 FBXO21O94952 628 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 TBX18O95935 607 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 RALAP11233 206 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 ATP5C1P36542 298 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 UBASH3AP57075 661 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 YWHAGP61981 247 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 MTF1Q14872 753 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 SLC44A4Q53GD3 710 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 BHLHA9Q7RTU4 235 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 TADA2BQ86TJ2 420 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 DDX42Q86XP3 938 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 KIAA1958Q8N8K9 716 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 PBXIP1Q96AQ6 731 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 ZFYVE19Q96K21 471 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 FAM83CQ9BQN1 747 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 CA14Q9ULX7 337 aa20.84■□□□□ 0.93
PDLIM2-207ENST00000409417 KRBA1A5PL33 1030 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 LEFTY2O00292 366 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 GFPT2O94808 682 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 DAOAP59103 153 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 PDCLQ13371 301 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 C10orf120Q5SQS8 335 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 HFE2Q6ZVN8 426 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 TMEM110Q86TL2 294 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 WDTC1Q8N5D0 677 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 TTC16Q8NEE8 873 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 IRGQQ8WZA9 623 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 DDX1Q92499 740 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 NDRG1Q92597 394 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 ZFRQ96KR1 1074 aaKnown RBP20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 GKN1Q9NS71 199 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 CYTH4Q9UIA0 394 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 DNMT3LQ9UJW3 386 aa20.83■□□□□ 0.93
PDLIM2-207ENST00000409417 YJEFN3A6XGL0 299 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 E7ENQ6 273 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 PIK3R2O00459 728 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 MLF2Q15773 248 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 IER5LQ5T953 404 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 CACNA2D4Q7Z3S7 1137 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 NOP9Q86U38 636 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 PASD1Q8IV76 773 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 SCUBE3Q8IX30 993 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 CSGALNACT1Q8TDX6 532 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 EPS8L1Q8TE68 723 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 OSCP1Q8WVF1 389 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 SHDQ96IW2 340 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 NOX5Q96PH1 765 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 CFAP97Q9P2B7 532 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 CEP83Q9Y592 693 aa20.82■□□□□ 0.92
PDLIM2-207ENST00000409417 SART1O43290 800 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms